Novel definition files for human GeneChips based on GeneAnnot. - Wikidata - wikimedia - TriplyDB

Novel definition files for human GeneChips based on GeneAnnot.

Novel definition files for human GeneChips based on GeneAnnot.

http://www.wikidata.org/entity/Q33305718

about

In-silico human genomics with GeneCards GeneCards Version 3: the human gene integrator Microarray experiments and factors which affect their reliability Drug off-target effects predicted using structural analysis in the context of a metabolic network model Reassessment of blood gene expression markers for the prognosis of relapsing-remitting multiple sclerosis Network motif-based method for identifying coronary artery disease Stable feature selection and classification algorithms for multiclass microarray data.Inference of dynamical gene-regulatory networks based on time-resolved multi-stimuli multi-experiment data applying NetGenerator V2.0.GATExplorer: genomic and transcriptomic explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs AnyExpress: integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm.Novel prognostic genes of diffuse large B-cell lymphoma revealed by survival analysis of gene expression data.Improving Cancer Gene Expression Data Quality through a TCGA Data-Driven Evaluation of Identifier Filtering.Salvaging Affymetrix probes after probe-level re-annotation Development and evaluation of new mask protocols for gene expression profiling in humans and chimpanzees.Transcript-specific expression profiles derived from sequence-based analysis of standard microarrays.The development of a comparison approach for Illumina bead chips unravels unexpected challenges applying newest generation microarrays.A-MADMAN: annotation-based microarray data meta-analysis tool.OligoRAP - an Oligo Re-Annotation Pipeline to improve annotation and estimate target specificity.Integrative modeling of transcriptional regulation in response to antirheumatic therapy SplicerAV: a tool for mining microarray expression data for changes in RNA processing.Comparison and consolidation of microarray data sets of human tissue expression.GeneSigDB--a curated database of gene expression signatures.GAS6 expression identifies high-risk adult AML patients: potential implications for therapy High-definition mapping of retroviral integration sites defines the fate of allogeneic T cells after donor lymphocyte infusion.Novel application of multi-stimuli network inference to synovial fibroblasts of rheumatoid arthritis patients From hybridization theory to microarray data analysis: performance evaluation.MAGIA²: from miRNA and genes expression data integrative analysis to microRNA-transcription factor mixed regulatory circuits (2012 update).Batch correction of microarray data substantially improves the identification of genes differentially expressed in rheumatoid arthritis and osteoarthritis.Differential expression of genes involved in the epigenetic regulation of cell identity in normal human mammary cell commitment and differentiation.The extended TILAR approach: a novel tool for dynamic modeling of the transcription factor network regulating the adaption to in vitro cultivation of murine hepatocytes.Multiple sclerosis: modulation of toll-like receptor (TLR) expression by interferon-β includes upregulation of TLR7 in plasmacytoid dendritic cells.Dynamic modelling of microRNA regulation during mesenchymal stem cell differentiation.Activating FLT3 mutants show distinct gain-of-function phenotypes in vitro and a characteristic signaling pathway profile associated with prognosis in acute myeloid leukemia.Genome-Wide Definition of Promoter and Enhancer Usage during Neural Induction of Human Embryonic Stem Cells.Comparing genotoxic signatures in cord blood cells from neonates exposed in utero to zidovudine or tenofovir.SCOREM: statistical consolidation of redundant expression measures.Gene expression profiling of ovarian carcinomas and prognostic analysis of outcome.Cell polarity, epithelial-mesenchymal transition, and cell-fate decision gene expression in ductal carcinoma in situ.Correction of beta-thalassemia major by gene transfer in haematopoietic progenitors of pediatric patients.Epithelial cell identity in hyperplastic precursors of breast cancer.

P2860

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P2860

Novel definition files for human GeneChips based on GeneAnnot.

http://www.wikidata.org/entity/Q33305718

description

2007 nî lūn-bûn

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2007 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

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2007 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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name

Novel definition files for human GeneChips based on GeneAnnot.

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Novel definition files for human GeneChips based on GeneAnnot.

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Novel definition files for human GeneChips based on GeneAnnot.

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type

label

Novel definition files for human GeneChips based on GeneAnnot.

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Novel definition files for human GeneChips based on GeneAnnot.

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Novel definition files for human GeneChips based on GeneAnnot.

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Novel definition files for human GeneChips based on GeneAnnot.

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Novel definition files for human GeneChips based on GeneAnnot.

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Novel definition files for human GeneChips based on GeneAnnot.

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1471-2105-8-446

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BMC Bioinformatics

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Novel definition files for human GeneChips based on GeneAnnot.

@en

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Alessandro Coppe

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Alexandra Sirota

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Gian Antonio Danieli

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Marilyn Safran

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Michael Shmoish

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P2860

Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data.

A sequence-based identification of the genes detected by probesets on the Affymetrix U133 plus 2.0 array

Alternative mapping of probes to genes for Affymetrix chips

Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.

Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips

Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: high-resolution annotation for microarrays

Sequence-matched probes produce increased cross-platform consistency and more reproducible biological results in microarray-based gene expression measurements.

GeneAnnot: comprehensive two-way linking between oligonucleotide array probesets and GeneCards genes.

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1471-2105-8-446

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446

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scholarly article

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10.1186/1471-2105-8-446

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8

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Francesco Ferrari

Silvio Bicciato

Stefania Bortoluzzi

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2007-11-15T00:00:00Z

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5842430

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1022787580

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18005434

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2216044

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