Predicting protein function with hierarchical phylogenetic profiles: the Gene3D Phylo-Tuner method applied to eukaryotic genomes
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SUPERFAMILY--sophisticated comparative genomics, data mining, visualization and phylogenyThe history of the CATH structural classification of protein domainsPhylogenetic Profiles Reveal Structural and Functional Determinants of Lipid-bindingPoGO: Prediction of Gene Ontology terms for fungal proteins.Combining modularity, conservation, and interactions of proteins significantly increases precision and coverage of protein function predictionGene3D: comprehensive structural and functional annotation of genomesComparison of eukaryotic phylogenetic profiling approaches using species tree aware methods.Finding the "dark matter" in human and yeast protein network prediction and modellingConserved synteny at the protein family level reveals genes underlying Shewanella species' cold tolerance and predicts their novel phenotypes.ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological processGene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis.Uncovering the molecular machinery of the human spindle--an integration of wet and dry systems biology.Practical aspects of protein co-evolutionPhyletic profiling with cliques of orthologs is enhanced by signatures of paralogy relationships.Protein annotation from protein interaction networks and Gene Ontology.Exploring potential new floral organ morphogenesis genes of Arabidopsis thaliana using systems biology approachPhylogenetic profiles reveal evolutionary relationships within the "twilight zone" of sequence similarity.Protein co-evolution, co-adaptation and interactions.Testing the accuracy of eukaryotic phylogenetic profiles for prediction of biological function.Comparative evolutionary analysis of protein complexes in E. coli and yeast.An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles.Uncovering the co-evolutionary network among prokaryotic genes.The CATH hierarchy revisited-structural divergence in domain superfamilies and the continuity of fold space.Metabolic Pathway Assignment of Plant Genes based on Phylogenetic Profiling-A Feasibility Study.A Preliminary Study on the Prediction of Human Protein Functions
P2860
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P2860
Predicting protein function with hierarchical phylogenetic profiles: the Gene3D Phylo-Tuner method applied to eukaryotic genomes
description
2007 nî lūn-bûn
@nan
2007 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Predicting protein function wi ...... applied to eukaryotic genomes
@ast
Predicting protein function wi ...... applied to eukaryotic genomes
@en
Predicting protein function wi ...... applied to eukaryotic genomes.
@nl
type
label
Predicting protein function wi ...... applied to eukaryotic genomes
@ast
Predicting protein function wi ...... applied to eukaryotic genomes
@en
Predicting protein function wi ...... applied to eukaryotic genomes.
@nl
prefLabel
Predicting protein function wi ...... applied to eukaryotic genomes
@ast
Predicting protein function wi ...... applied to eukaryotic genomes
@en
Predicting protein function wi ...... applied to eukaryotic genomes.
@nl
P2860
P1476
Predicting protein function wi ...... applied to eukaryotic genomes
@en
P2093
Alastair Grant
Juan A G Ranea
P2860
P356
10.1371/JOURNAL.PCBI.0030237
P577
2007-10-18T00:00:00Z