Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs.
about
Contrasting GC-content dynamics across 33 mammalian genomes: relationship with life-history traits and chromosome sizesConsistency of VDJ Rearrangement and Substitution Parameters Enables Accurate B Cell Receptor Sequence AnnotationThe molecular signal for the adaptation to cold temperature during early life on EarthA branch-heterogeneous model of protein evolution for efficient inference of ancestral sequencesA new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape speciesA phylogenomic approach to vertebrate phylogeny supports a turtle-archosaur affinity and a possible paraphyletic lissamphibiaPhylogenetic relationships among the colobine monkeys revisited: new insights from analyses of complete mt genomes and 44 nuclear non-coding markersDynamic evolution of base composition: causes and consequences in avian phylogenomicsEM for phylogenetic topology reconstruction on nonhomogeneous dataBio++: efficient extensible libraries and tools for computational molecular evolution.Compositional heterogeneity and phylogenomic inference of metazoan relationships.Molecular evolution of the deuterolysin (M35) family genes in CoccidioidesFast and robust characterization of time-heterogeneous sequence evolutionary processes using substitution mappingRY-Coding and Non-Homogeneous Models Can Ameliorate the Maximum-Likelihood Inferences From Nucleotide Sequence Data with Parallel Compositional Heterogeneity.Efficient exploration of the space of reconciled gene trees.Reconstructed Ancestral Enzymes Impose a Fitness Cost upon Modern Bacteria Despite Exhibiting Favourable Biochemical Properties.SENCA: A Multilayered Codon Model to Study the Origins and Dynamics of Codon Usage.BBCA: Improving the scalability of *BEAST using random binning.CompPhy: a web-based collaborative platform for comparing phylogenies.Toward more accurate ancestral protein genotype-phenotype reconstructions with the use of species tree-aware gene trees.Biased gene conversion and GC-content evolution in the coding sequences of reptiles and vertebrates.Reconstructed ancestral Myo-inositol-3-phosphate synthases indicate that ancestors of the Thermococcales and Thermotoga species were more thermophilic than their descendants.Evolutionary consequences of DNA methylation on the GC content in vertebrate genomesA rooted net of life.Weighted Statistical Binning: Enabling Statistically Consistent Genome-Scale Phylogenetic Analyses.Evaluation of Ancestral Sequence Reconstruction Methods to Infer Nonstationary Patterns of Nucleotide SubstitutionLikelihood-Based Inference of B Cell Clonal Families.Less effective selection leads to larger genomes.Recombination Rate Variation Modulates Gene Sequence Evolution Mainly via GC-Biased Gene Conversion, Not Hill-Robertson Interference, in an Avian System.TRIMming p53 for ubiquitinationAncestral population genomics: the coalescent hidden Markov model approach.Analytical Biases Associated with GC-Content in Molecular Evolution.Detecting coevolving positions in a molecule: why and how to account for phylogeny.Horizontal Gene Transfer and the History of Life.New Statistical Criteria Detect Phylogenetic Bias Caused by Compositional Heterogeneity.Life History Traits, Protein Evolution, and the Nearly Neutral Theory in Amniotes.Invariant Versus Classical Quartet Inference When Evolution is Heterogeneous Across Sites and Lineages.Fitting nonstationary general-time-reversible models to obtain edge-lengths and frequencies for the barry-hartigan model.MafFilter: a highly flexible and extensible multiple genome alignment files processorMolBioLib: a C++11 framework for rapid development and deployment of bioinformatics tasks.
P2860
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P2860
Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs.
description
2008 nî lūn-bûn
@nan
2008 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2008 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
Non-homogeneous models of sequ ...... ite of libraries and programs.
@ast
Non-homogeneous models of sequ ...... ite of libraries and programs.
@en
type
label
Non-homogeneous models of sequ ...... ite of libraries and programs.
@ast
Non-homogeneous models of sequ ...... ite of libraries and programs.
@en
prefLabel
Non-homogeneous models of sequ ...... ite of libraries and programs.
@ast
Non-homogeneous models of sequ ...... ite of libraries and programs.
@en
P2860
P356
P1476
Non-homogeneous models of sequ ...... ite of libraries and programs.
@en
P2860
P2888
P356
10.1186/1471-2148-8-255
P577
2008-09-22T00:00:00Z
P5875
P6179
1022388346