Effect of PCR amplicon size on assessments of clone library microbial diversity and community structure
about
First investigation of the microbiology of the deepest layer of ocean crustThe truth about metagenomics: quantifying and counteracting bias in 16S rRNA studiesImproved dsrA-based terminal restriction fragment length polymorphism analysis of sulfate-reducing bacteriaHighly sensitive detection of Staphylococcus aureus directly from patient bloodBIPES, a cost-effective high-throughput method for assessing microbial diversity.Microbiological characterization of post-eruption "snowblower" vents at Axial Seamount, Juan de Fuca Ridge.Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniques.Disturbance induced decoupling between host genetics and composition of the associated microbiome.Evolutionary history of the sequestrate genus Rossbeevera (Boletaceae) reveals a new genus Turmalinea and highlights the utility of ITS minisatellite-like insertions for molecular identification.Benthic bacterial diversity in submerged sinkhole ecosystems.Ironing out the wrinkles in the rare biosphere through improved OTU clusteringITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases.Effects of polymerase, template dilution and cycle number on PCR based 16 S rRNA diversity analysis using the deep sequencing method.Investigating microbial eukaryotic diversity from a global census: insights from a comparison of pyrotag and full-length sequences of 18S rRNA genesCommunity structures of fecal bacteria in cattle from different animal feeding operations.A diverse bacterial community in an anoxic quinoline-degrading bioreactor determined by using pyrosequencing and clone library analysis.eulerAPE: drawing area-proportional 3-Venn diagrams using ellipses.Characterization of the bacterial community structure of Sydney Tar Ponds sediment.Comparison of normalization methods for construction of large, multiplex amplicon pools for next-generation sequencing.Target region selection is a critical determinant of community fingerprints generated by 16S pyrosequencingMolecular survey of concrete sewer biofilm microbial communities.Two decades of describing the unseen majority of aquatic microbial diversity.Comparison of morphological and molecular genetic quantification of relative abundance of arbuscular mycorrhizal fungi within roots.Comparing the hyper-variable V4 and V9 regions of the small subunit rDNA for assessment of ciliate environmental diversity.Amplification by PCR artificially reduces the proportion of the rare biosphere in microbial communities.Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct phylogenetic lineages.Bacterial community shift in treated periodontitis patients revealed by ion torrent 16S rRNA gene amplicon sequencing.High throughput whole rumen metagenome profiling using untargeted massively parallel sequencingGroundtruthing next-gen sequencing for microbial ecology-biases and errors in community structure estimates from PCR amplicon pyrosequencingComparison of the levels of bacterial diversity in freshwater, intertidal wetland, and marine sediments by using millions of illumina tags.Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study.Microbial communities of the upper respiratory tract and otitis media in children.Fungal community analysis by high-throughput sequencing of amplified markers--a user's guideNext-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms.A three-scale analysis of bacterial communities involved in rocks colonization and soil formation in high mountain environments.A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contentsPreliminary assessment of microbiome changes following blood-feeding and survivorship in the Amblyomma americanum nymph-to-adult transition using semiconductor sequencingNext generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single locationPerformance comparison of genetic markers for high-throughput sequencing-based biodiversity assessment in complex communities.Comparing High-throughput Platforms for Sequencing the V4 Region of SSU-rDNA in Environmental Microbial Eukaryotic Diversity Surveys.
P2860
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P2860
Effect of PCR amplicon size on assessments of clone library microbial diversity and community structure
description
2009 nî lūn-bûn
@nan
2009 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
Effect of PCR amplicon size on ...... ersity and community structure
@ast
Effect of PCR amplicon size on ...... ersity and community structure
@en
type
label
Effect of PCR amplicon size on ...... ersity and community structure
@ast
Effect of PCR amplicon size on ...... ersity and community structure
@en
prefLabel
Effect of PCR amplicon size on ...... ersity and community structure
@ast
Effect of PCR amplicon size on ...... ersity and community structure
@en
P2860
P50
P1476
Effect of PCR amplicon size on ...... ersity and community structure
@en
P2093
Mitchell L Sogin
Phillip R Neal
P2860
P304
P356
10.1111/J.1462-2920.2008.01857.X
P577
2009-02-09T00:00:00Z