Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome. - Wikidata - wikimedia - TriplyDB

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome.

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome.

http://www.wikidata.org/entity/Q33413039

about

Experimental strategies for microRNA target identification starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data Small RNAs in Plant Responses to Abiotic Stresses: Regulatory Roles and Study Methods Cytoplasmic male sterility (CMS) in hybrid breeding in field crops The human mitochondrial transcriptome and the RNA-binding proteins that regulate its expression System approaches to study root hairs as a single cell plant model: current status and future perspectives Finding microRNA targets in plants: current status and perspectives Identification of miRNAs and Their Targets in the Liverwort Marchantia polymorpha by Integrating RNA-Seq and Degradome Analyses miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis.Identification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis A highly conserved, small LTR retrotransposon that preferentially targets genes in grass genomes Identification of Ice Plant (Mesembryanthemum crystallinum L.) MicroRNAs Using RNA-Seq and Their Putative Roles in High Salinity Responses in Seedlings sPARTA: a parallelized pipeline for integrated analysis of plant miRNA and cleaved mRNA data sets, including new miRNA target-identification software Exploration of microRNAs and their targets engaging in the resistance interaction between wheat and stripe rust.Beyond cleaved small RNA targets: unraveling the complexity of plant RNA degradome data.Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing.Identification of soybean seed developmental stage-specific and tissue-specific miRNA targets by degradome sequencing.High-throughput sequencing and degradome analysis identify miRNAs and their targets involved in fruit senescence of Fragaria ananassa Identification of microRNAs Involved in Regeneration of the Secondary Vascular System in Populus tomentosa Carr.Identification of Salt Tolerance-related microRNAs and Their Targets in Maize (Zea mays L.) Using High-throughput Sequencing and Degradome Analysis.Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome.Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon.A global profiling of uncapped mRNAs under cold stress reveals specific decay patterns and endonucleolytic cleavages in Brachypodium distachyon.Global gene expression defines faded whorl specification of double flower domestication in Camellia Macros in microRNA target identification: a comparative analysis of in silico, in vitro, and in vivo approaches to microRNA target identification.Integrated analysis of tobacco miRNA and mRNA expression profiles under PVY infection provids insight into tobacco-PVY interactions Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis.Exploring microRNA-like small RNAs in the filamentous fungus Fusarium oxysporum Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange.Large-scale identification of mirtrons in Arabidopsis and rice.Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum).Isolation and identification of miRNAs in Jatropha curcas.A combined approach of high-throughput sequencing and degradome analysis reveals tissue specific expression of microRNAs and their targets in cucumber.Uncovering small RNA-mediated responses to cold stress in a wheat thermosensitive genic male-sterile line by deep sequencing.Target mimics: an embedded layer of microRNA-involved gene regulatory networks in plants miRNA regulation in the early development of barley seed Transcriptome-wide characterization of miRNA-directed and non-miRNA-directed endonucleolytic cleavage using Degradome analysis under low ambient temperature in Phalaenopsis aphrodite subsp. formosana.Genome-wide identification of reverse complementary microRNA genes in plants StarScan: a web server for scanning small RNA targets from degradome sequencing data

P2860

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P2860

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome.

http://www.wikidata.org/entity/Q33413039

description

2009 nî lūn-bûn

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2009 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի հունվարին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年论文

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name

Construction of Parallel Analy ...... targets and the RNA degradome.

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Construction of Parallel Analy ...... targets and the RNA degradome.

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Construction of Parallel Analy ...... targets and the RNA degradome.

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Construction of Parallel Analy ...... targets and the RNA degradome.

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Construction of Parallel Analy ...... targets and the RNA degradome.

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Nature Protocols

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Construction of Parallel Analy ...... targets and the RNA degradome.

@en

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Gary Schroth

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Marcelo A German

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Pamela J Green

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Shujun Luo

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P2860

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

miRU: an automated plant miRNA target prediction server.

RNA interference is mediated by 21- and 22-nucleotide RNAs

MicroRNA-directed cleavage of HOXB8 mRNA

Prediction of plant microRNA targets

MicroRNAS and their regulatory roles in plants

Computational identification of plant microRNAs and their targets, including a stress-induced miRNA

MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells

Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes

Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA

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356-362

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10.1038/NPROT.2009.8

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3

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4

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1002039089

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19247285

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