HaMStR: profile hidden markov model based search for orthologs in ESTs - Wikidata - wikimedia - TriplyDB

HaMStR: profile hidden markov model based search for orthologs in ESTs

HaMStR: profile hidden markov model based search for orthologs in ESTs

http://www.wikidata.org/entity/Q33479760

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Eupolybothrus cavernicolus Komerički & Stoev sp. n. (Chilopoda: Lithobiomorpha: Lithobiidae): the first eukaryotic species description combining transcriptomic, DNA barcoding and micro-CT imaging data Broad phylogenomic sampling and the sister lineage of land plants Are 100 enough? Inferring acanthomorph teleost phylogeny using Anchored Hybrid Enrichment Transcriptome data reveal Syndermatan relationships and suggest the evolution of endoparasitism in Acanthocephala via an epizoic stage Phylogenomic analyses of nuclear genes reveal the evolutionary relationships within the BEP clade and the evidence of positive selection in Poaceae Molecular classification based on apomorphic amino acids (Arthropoda, Hexapoda): Integrative taxonomy in the era of phylogenomics Bioinformatics analysis of large-scale viral sequences: from construction of data sets to annotation of a phylogenetic tree Error, signal, and the placement of Ctenophora sister to all other animals Phylotranscriptomics to bring the understudied into the fold: monophyletic ostracoda, fossil placement, and pancrustacean phylogeny Phylogenomic analyses unravel annelid evolution Corallimorpharians are not "naked corals": insights into relationships between Scleractinia and Corallimorpharia from phylogenomic analyses Multiple Polyploidization Events across Asteraceae with Two Nested Events in the Early History Revealed by Nuclear Phylogenomics Resolution of Brassicaceae Phylogeny Using Nuclear Genes Uncovers Nested Radiations and Supports Convergent Morphological Evolution Spider phylogenomics: untangling the Spider Tree of Life Relationships within Cladobranchia (Gastropoda: Nudibranchia) based on RNA-Seq data: an initial investigation Molecular phylogeny of Squaliformes and first occurrence of bioluminescence in sharks Potential conservation of circadian clock proteins in the phylum Nematoda as revealed by bioinformatic searches Osiris: accessible and reproducible phylogenetic and phylogenomic analyses within the Galaxy workflow management system Evolutionary relatedness does not predict competition and co-occurrence in natural or experimental communities of green algae Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times Phylogenomics provides strong evidence for relationships of butterflies and moths Phylogenomics reveals deep molluscan relationships Decisive data sets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects De novo characterization of the gene-rich transcriptomes of two color-polymorphic spiders, Theridion grallator and T. californicum (Araneae: Theridiidae), with special reference to pigment genes Phylotranscriptomics: saturated third codon positions radically influence the estimation of trees based on next-gen data Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles Ordinal-level phylogenomics of the arthropod class Diplopoda (millipedes) based on an analysis of 221 nuclear protein-coding loci generated using next-generation sequence analyses Toward community standards in the quest for orthologs Phylogenomics resolves the timing and pattern of insect evolution Xenacoelomorpha is the sister group to Nephrozoa Ancestral polyploidy in seed plants and angiosperms The evolutionary history of holometabolous insects inferred from transcriptome-based phylogeny and comprehensive morphological data.Insect phylogenomics: exploring the source of incongruence using new transcriptomic data.Evolution of the assassin's arms: insights from a phylogeny of combined transcriptomic and ribosomal DNA data (Heteroptera: Reduvioidea)discomark: nuclear marker discovery from orthologous sequences using draft genome data.Phylogenomics Using Transcriptome Data.BLAST-EXPLORER helps you building datasets for phylogenetic analysis.Evolution of Rosaceae Fruit Types Based on Nuclear Phylogeny in the Context of Geological Times and Genome Duplication.Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny.

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P2860

HaMStR: profile hidden markov model based search for orthologs in ESTs

http://www.wikidata.org/entity/Q33479760

description

2009 nî lūn-bûn

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2009 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի հուլիսին հրատարակված գիտական հոդված

@hy

2009年の論文

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2009年論文

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2009年論文

@zh-hant

2009年論文

@zh-hk

2009年論文

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2009年論文

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2009年论文

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name

HaMStR: profile hidden markov model based search for orthologs in ESTs

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HaMStR: profile hidden markov model based search for orthologs in ESTs

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type

label

HaMStR: profile hidden markov model based search for orthologs in ESTs

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HaMStR: profile hidden markov model based search for orthologs in ESTs

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prefLabel

HaMStR: profile hidden markov model based search for orthologs in ESTs

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HaMStR: profile hidden markov model based search for orthologs in ESTs

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1471-2148-9-157

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BMC Evolutionary Biology

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HaMStR: profile hidden markov model based search for orthologs in ESTs

@en

P2093

Arndt von Haeseler

http://www.w3.org/2001/XMLSchema#string

Ingo Ebersberger

http://www.w3.org/2001/XMLSchema#string

Sascha Strauss

http://www.w3.org/2001/XMLSchema#string

P2860

GeneWise and Genomewise

A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

Broad phylogenomic sampling improves resolution of the animal tree of life

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

MAFFT version 5: improvement in accuracy of multiple sequence alignment

The COG database: new developments in phylogenetic classification of proteins from complete genomes

Orthology prediction at scalable resolution by phylogenetic tree analysis

BLAT--the BLAST-like alignment tool

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1471-2148-9-157

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157

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scholarly article

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10.1186/1471-2148-9-157

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9

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2009-07-08T00:00:00Z

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26655755

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1045090576

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19586527

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2723089

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