Evaluation of three automated genome annotations for Halorhabdus utahensis. - Wikidata - wikimedia - TriplyDB

Evaluation of three automated genome annotations for Halorhabdus utahensis.

Evaluation of three automated genome annotations for Halorhabdus utahensis.

http://www.wikidata.org/entity/Q33484176

about

Complete genome sequence of Archaeoglobus profundus type strain (AV18)NADPH-generating systems in bacteria and archaea Exploring the genetic basis of variation in gene predictions with a synthetic association study Genome sequencing of bacteria: sequencing, de novo assembly and rapid analysis using open source tools A comprehensive benchmark study of multiple sequence alignment methods: current challenges and future perspectives.Assessment of genome annotation using gene function similarity within the gene neighborhood.Improving pan-genome annotation using whole genome multiple alignment.Use of low-coverage, large-insert, short-read data for rapid and accurate generation of enhanced-quality draft Pseudomonas genome sequences The core and unique proteins of haloarchaea.Comparative omics-driven genome annotation refinement: application across Yersiniae Halophiles 2010: life in saline environments.Amino acid substitutions in cold-adapted proteins from Halorubrum lacusprofundi, an extremely halophilic microbe from antarctica On the power and limits of evolutionary conservation--unraveling bacterial gene regulatory networks.HaloWeb: the haloarchaeal genomes database.ORFcor: identifying and accommodating ORF prediction inconsistencies for phylogenetic analysis Reduce manual curation by combining gene predictions from multiple annotation engines, a case study of start codon prediction A semi-automated genome annotation comparison and integration scheme.Identification and characterization of three novel lipases belonging to families II and V from Anaerovibrio lipolyticus 5ST.When plants produce not enough or at all: metabolic engineering of flavonoids in microbial hosts.Misannotations of rRNA can now generate 90% false positive protein matches in metatranscriptomic studies.An integrative method for identifying the over-annotated protein-coding genes in microbial genomes.Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum A Novel Quality Measure and Correction Procedure for the Annotation of Microbial Translation Initiation Sites.BEACON: automated tool for Bacterial GEnome Annotation ComparisON Genome (re-)annotation and open-source annotation pipelines.Genome Report: Identification and Validation of Antigenic Proteins from Pajaroellobacter abortibovis Using De Novo Genome Sequence Assembly and Reverse Vaccinology.Proteogenomics in microbiology: taking the right turn at the junction of genomics and proteomics.Improving genome annotation of enterotoxigenic Escherichia coli TW10598 by a label-free quantitative MS/MS approach.SearchDOGS bacteria, software that provides automated identification of potentially missed genes in annotated bacterial genomes SpectroGene: A Tool for Proteogenomic Annotations Using Top-Down Spectra.Reannotation of translational start sites in the genome of Mycobacterium tuberculosis.An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics.Comparative genome analysis of fish and human isolates of Mycobacterium marinum.Identification of a haloalkaliphilic and thermostable cellulase with improved ionic liquid tolerance Genome comparison of two Exiguobacterium strains from high altitude andean lakes with different arsenic resistance: identification and 3D modeling of the Acr3 efflux pump

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Evaluation of three automated genome annotations for Halorhabdus utahensis.

http://www.wikidata.org/entity/Q33484176

description

2009 nî lūn-bûn

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2009 թուականի Յուլիսին հրատարակուած գիտական յօդուած

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2009 թվականի հուլիսին հրատարակված գիտական հոդված

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2009年の論文

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2009年学术文章

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2009年学术文章

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2009年学术文章

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2009年学术文章

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2009年学术文章

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2009年學術文章

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name

Evaluation of three automated genome annotations for Halorhabdus utahensis.

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Evaluation of three automated genome annotations for Halorhabdus utahensis.

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Evaluation of three automated genome annotations for Halorhabdus utahensis.

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Evaluation of three automated genome annotations for Halorhabdus utahensis.

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Evaluation of three automated genome annotations for Halorhabdus utahensis.

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Evaluation of three automated genome annotations for Halorhabdus utahensis.

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Evaluation of three automated genome annotations for Halorhabdus utahensis.

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A Malcolm Campbell

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Jay McNair

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Kjeld Ingvorsen

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Laura Voss

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Laurie J Heyer

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P2860

Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes

The RAST Server: rapid annotations using subsystems technology

Advanced sequencing technologies and their wider impact in microbiology

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

DNA replication in the archaea

The integrated microbial genomes (IMG) system

The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites

Genome Information Broker (GIB): data retrieval and comparative analysis system for completed microbial genomes and more.

Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah.

Correlations between Shine-Dalgarno sequences and gene features such as predicted expression levels and operon structures

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