Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data.
about
Phased whole-genome genetic risk in a family quartet using a major allele reference sequenceThe Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomesCustomisation of the exome data analysis pipeline using a combinatorial approachCritical evaluation of imprinted gene expression by RNA-Seq: a new perspectiveSequencing pools of individuals — mining genome-wide polymorphism data without big fundingRNA sequencing reveals the role of splicing polymorphisms in regulating human gene expressionChallenges, Solutions, and Quality Metrics of Personal Genome Assembly in Advancing Precision MedicineGenetic variation of pre-mRNA alternative splicing in human populationsThree-stage quality control strategies for DNA re-sequencing dataHigh-throughput sequencing in mitochondrial DNA researchAdvanced Applications of RNA Sequencing and ChallengesMitochondrial DNA heteroplasmy in the emerging field of massively parallel sequencingRNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing dataRNA Sequencing and AnalysisRASER: reads aligner for SNPs and editing sites of RNAOdintifier--A computational method for identifying insertions of organellar origin from modern and ancient high-throughput sequencing data based on haplotype phasingGenetics of gene expression in CNSSingle Nucleotide Polymorphism (SNP) Detection and Genotype Calling from Massively Parallel Sequencing (MPS) DataWhole transcriptome RNA-Seq allelic expression in human brainNext-generation genomics: an integrative approachA reduced representation approach to population genetic analyses and applications to human evolutionUnderstanding mechanisms underlying human gene expression variation with RNA sequencingSuitability of Different Mapping Algorithms for Genome-wide Polymorphism Scans with Pool-Seq DataSNP-guided identification of monoallelic DNA-methylation events from enrichment-based sequencing data.Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing dataUnraveling the clonal hierarchy of somatic genomic aberrations.Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data.eQTL Mapping Using RNA-seq DataScreening for SNPs with Allele-Specific Methylation based on Next-Generation Sequencing Data.PurBayes: estimating tumor cellularity and subclonality in next-generation sequencing dataSources of bias in measures of allele-specific expression derived from RNA-sequence data aligned to a single reference genome.Genome-wide quantification of homeolog expression ratio revealed nonstochastic gene regulation in synthetic allopolyploid Arabidopsis.Estimates of allele-specific expression in Drosophila with a single genome sequence and RNA-seq data.A novel multi-alignment pipeline for high-throughput sequencing data.Comparing reference-based RNA-Seq mapping methods for non-human primate data.Transcriptome assembly and quantification from Ion Torrent RNA-Seq data.Comparing computational methods for identification of allele-specific expression based on next generation sequencing data.A flexible Bayesian method for detecting allelic imbalance in RNA-seq dataMapping Bias Overestimates Reference Allele Frequencies at the HLA Genes in the 1000 Genomes Project Phase I Data.Assessing allele-specific expression across multiple tissues from RNA-seq read data
P2860
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P2860
Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data.
description
2009 nî lūn-bûn
@nan
2009 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
Effect of read-mapping biases ...... sion from RNA-sequencing data.
@ast
Effect of read-mapping biases ...... sion from RNA-sequencing data.
@en
type
label
Effect of read-mapping biases ...... sion from RNA-sequencing data.
@ast
Effect of read-mapping biases ...... sion from RNA-sequencing data.
@en
prefLabel
Effect of read-mapping biases ...... sion from RNA-sequencing data.
@ast
Effect of read-mapping biases ...... sion from RNA-sequencing data.
@en
P2093
P2860
P356
P1433
P1476
Effect of read-mapping biases ...... sion from RNA-sequencing data.
@en
P2093
Athma A Pai
Everlyne Nkadori
Jacob F Degner
Jonathan K Pritchard
Joseph K Pickrell
Yoav Gilad
P2860
P304
P356
10.1093/BIOINFORMATICS/BTP579
P407
P577
2009-10-06T00:00:00Z