A SNP discovery method to assess variant allele probability from next-generation resequencing data. - Wikidata - wikimedia - TriplyDB

A SNP discovery method to assess variant allele probability from next-generation resequencing data.

A SNP discovery method to assess variant allele probability from next-generation resequencing data.

http://www.wikidata.org/entity/Q33519472

about

Repetitive DNA and next-generation sequencing: computational challenges and solutions Mutations in NMNAT1 cause Leber congenital amaurosis and identify a new disease pathway for retinal degeneration Best practices for evaluating single nucleotide variant calling methods for microbial genomics Analysis of next-generation genomic data in cancer: accomplishments and challenges Single Nucleotide Polymorphism (SNP) Detection and Genotype Calling from Massively Parallel Sequencing (MPS) Data Low diversity in the mitogenome of sperm whales revealed by next-generation sequencing Annotate-it: a Swiss-knife approach to annotation, analysis and interpretation of single nucleotide variation in human disease High accuracy mutation detection in leukemia on a selected panel of cancer genes Genetic diversity in India and the inference of Eurasian population expansion A framework for variation discovery and genotyping using next-generation DNA sequencing data An open access pilot freely sharing cancer genomic data from participants in Texas.ReQON: a Bioconductor package for recalibrating quality scores from next-generation sequencing data.PyroHMMsnp: an SNP caller for Ion Torrent and 454 sequencing data.PyroHMMvar: a sensitive and accurate method to call short indels and SNPs for Ion Torrent and 454 data.Comparing a few SNP calling algorithms using low-coverage sequencing data.Coval: improving alignment quality and variant calling accuracy for next-generation sequencing data.VarBin, a novel method for classifying true and false positive variants in NGS data.ConPADE: genome assembly ploidy estimation from next-generation sequencing data Review of alignment and SNP calling algorithms for next-generation sequencing data.MAFsnp: A Multi-Sample Accurate and Flexible SNP Caller Using Next-Generation Sequencing Data.A Bayesian Model for SNP Discovery Based on Next-Generation Sequencing Data.4Pipe4--A 454 data analysis pipeline for SNP detection in datasets with no reference sequence or strain information.An empirical Bayes method for genotyping and SNP detection using multi-sample next-generation sequencing data.Efficient SNP Discovery by Combining Microarray and Lab-on-a-Chip Data for Animal Breeding and Selection.Discovery of Single Nucleotide Polymorphisms in Complex Genomes Using SGSautoSNP.Challenges of sequencing human genomes.Mutations in VRK1 associated with complex motor and sensory axonal neuropathy plus microcephaly.High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum.Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines.No more non-model species: the promise of next generation sequencing for comparative immunology.Partial uniparental isodisomy of chromosome 16 unmasks a deleterious biallelic mutation in IFT140 that causes Mainzer-Saldino syndrome.Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta)Discovery of single-nucleotide polymorphisms (SNPs) in the uncharacterized genome of the ascomycete Ophiognomonia clavigignenti-juglandacearum from 454 sequence data.SNVer: a statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data.An integrative variant analysis suite for whole exome next-generation sequencing data.SNP calling using genotype model selection on high-throughput sequencing data.Low-pass genome-wide sequencing and variant inference using identity-by-descent in an isolated human population.Detection of ultra-rare mutations by next-generation sequencing.Whole-exome sequencing reveals GPIHBP1 mutations in infantile colitis with severe hypertriglyceridemia.Global mutational profiling of formalin-fixed human colon cancers from a pathology archive

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P2860

A SNP discovery method to assess variant allele probability from next-generation resequencing data.

http://www.wikidata.org/entity/Q33519472

description

2009 nî lūn-bûn

@nan

2009 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年论文

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name

A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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A SNP discovery method to asse ...... -generation resequencing data.

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Genome Research

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A SNP discovery method to asse ...... -generation resequencing data.

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Cristian Coarfa

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David A Wheeler

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Elizabeth A Ostrowski

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Fuli Yu

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Lei Chen

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Rafal Drabek

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Richard A Gibbs

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Yue Liu

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Yufeng Shen

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Zhengzheng Wan

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P2860

The complete genome of an individual by massively parallel DNA sequencing

Genome sequencing in microfabricated high-density picolitre reactors

DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome

Mapping short DNA sequencing reads and calling variants using mapping quality scores

BLAT--the BLAST-like alignment tool

Base-calling of automated sequencer traces using phred. II. Error probabilities

Next-generation DNA sequencing

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

An SNP map of the human genome generated by reduced representation shotgun sequencing.

Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus

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10.1101/GR.096388.109

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2

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20

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George Weinstock

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2009-12-17T00:00:00Z

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40696507

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20019143

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2813483

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