The value of position-specific priors in motif discovery using MEME.
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EXTREME: an online EM algorithm for motif discoveryStructural basis for the molecular evolution of SRP-GTPase activation by proteinSelective binding of nuclear alpha-synuclein to the PGC1alpha promoter under conditions of oxidative stress may contribute to losses in mitochondrial function: implications for Parkinson's diseaseMotifLab: a tools and data integration workbench for motif discovery and regulatory sequence analysis.Computational Methods for CLIP-seq Data Processing.A review of ensemble methods for de novo motif discovery in ChIP-Seq data.A Fast Cluster Motif Finding Algorithm for ChIP-Seq Data Sets.Stochastic EM-based TFBS motif discovery with MITSUPISMA: A Visual Representation of Motif Distribution in DNA Sequences.PriorsEditor: a tool for the creation and use of positional priors in motif discovery.Processing and analyzing ChIP-seq data: from short reads to regulatory interactions.Strain-specific copy number variation in the intelectin locus on the 129 mouse chromosome 1.Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genomeIdentification and characterization of a novel 21.6-kDa tegumental protein from Clonorchis sinensis.Identification and localisation of the NB-LRR gene family within the potato genome.A genome-wide survey of switchgrass genome structure and organization.Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism.Discovering homotypic binding events at high spatial resolution.TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins.Comprehensive human transcription factor binding site map for combinatory binding motifs discovery.Theoretical and empirical quality assessment of transcription factor-binding motifs.Genome-wide identification of chromatin transitional regions reveals diverse mechanisms defining the boundary of facultative heterochromatinSTEME: a robust, accurate motif finder for large data sets.Encoded expansion: an efficient algorithm to discover identical string motifs.Non-overlapping progesterone receptor cistromes contribute to cell-specific transcriptional outcomesRecent computational developments on CLIP-seq data analysis and microRNA targeting implications.A system of repressor gradients spatially organizes the boundaries of Bicoid-dependent target genes.Motif discovery and transcription factor binding sites before and after the next-generation sequencing era.Regulation of normal B-cell differentiation and malignant B-cell survival by OCT2.ER-stress-induced transcriptional regulation increases protein synthesis leading to cell death.Divergent DNA Methylation Provides Insights into the Evolution of Duplicate Genes in Zebrafish.An Entropy-Based Position Projection Algorithm for Motif Discovery.DNA methylation and evolution of duplicate genes.Repulsive parallel MCMC algorithm for discovering diverse motifs from large sequence sets.Predicting cell-type-specific gene expression from regions of open chromatin.Mutant p53 is a transcriptional co-factor that binds to G-rich regulatory regions of active genes and generates transcriptional plasticity.Transcriptome-Wide Analysis Reveals Modulation of Human Macrophage Inflammatory Phenotype Through Alternative Splicing.The XXmotif web server for eXhaustive, weight matriX-based motif discovery in nucleotide sequences.GRISOTTO: A greedy approach to improve combinatorial algorithms for motif discovery with prior knowledge.P-value-based regulatory motif discovery using positional weight matrices.
P2860
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P2860
The value of position-specific priors in motif discovery using MEME.
description
2010 nî lūn-bûn
@nan
2010 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
The value of position-specific priors in motif discovery using MEME.
@ast
The value of position-specific priors in motif discovery using MEME.
@en
The value of position-specific priors in motif discovery using MEME.
@nl
type
label
The value of position-specific priors in motif discovery using MEME.
@ast
The value of position-specific priors in motif discovery using MEME.
@en
The value of position-specific priors in motif discovery using MEME.
@nl
prefLabel
The value of position-specific priors in motif discovery using MEME.
@ast
The value of position-specific priors in motif discovery using MEME.
@en
The value of position-specific priors in motif discovery using MEME.
@nl
P2860
P50
P356
P1433
P1476
The value of position-specific priors in motif discovery using MEME.
@en
P2093
Tom Whitington
P2860
P2888
P356
10.1186/1471-2105-11-179
P577
2010-04-09T00:00:00Z