Computational approaches to mapping allosteric pathways.
about
Biophysical and computational methods to analyze amino acid interaction networks in proteinsRevealing Atomic-Level Mechanisms of Protein Allostery with Molecular Dynamics SimulationsPrinciples and Overview of Sampling Methods for Modeling Macromolecular Structure and DynamicsAll-Atom Molecular Dynamics of Virus Capsids as Drug TargetsIntegrating atomistic molecular dynamics simulations, experiments, and network analysis to study protein dynamics: strength in unity.Protein structural robustness to mutations: an in silico investigation.DNA-binding protects p53 from interactions with cofactors involved in transcription-independent functions.An optimal distance cutoff for contact-based Protein Structure Networks using side-chain centers of mass.Two pathways mediate interdomain allosteric regulation in pin1Discovery of multiple hidden allosteric sites by combining Markov state models and experimentsAllostery through the computational microscope: cAMP activation of a canonical signalling domainAllosteric Communication Disrupted by a Small Molecule Binding to the Imidazole Glycerol Phosphate Synthase Protein-Protein Interface.Protein Allostery and Conformational Dynamics.Benchmarking predictions of allostery in liver pyruvate kinase in CAGI4.Information flow and protein dynamics: the interplay between nuclear magnetic resonance spectroscopy and molecular dynamics simulations.Probing allosteric mechanisms using native mass spectrometry.Adaptability of protein structures to enable functional interactions and evolutionary implications.Elucidation of potential sites for antibody engineering by fluctuation editing.Protein-Protein Interface and Disease: Perspective from Biomolecular Networks.Applications of NMR and computational methodologies to study protein dynamics.Ultraslow Water-Mediated Transmembrane Interactions Regulate the Activation of A2A Adenosine Receptor.Rapid Characterization of Allosteric Networks with Ensemble Normal Mode AnalysisInvestigating Small-Molecule Ligand Binding to G Protein-Coupled Receptors with Biased or Unbiased Molecular Dynamics Simulations.Uncoupling of an ammonia channel as a mechanism of allosteric inhibition in anthranilate synthase of Serratia marcescens: dynamic and graph theoretical analysis.Hidden electrostatic basis of dynamic allostery in a PDZ domain.Quantifying Allosteric Communication via Both Concerted Structural Changes and Conformational Disorder with CARDS.Specific DNA sequences allosterically enhance protein-protein interaction in a transcription factor through modulation of protein dynamics: implications for specificity of gene regulation.Energy transport pathway in proteins: Insights from non-equilibrium molecular dynamics with elastic network model.Computational Structural Biology of -nitrosylation of Cancer Targets
P2860
Q26738619-85E60E96-DF68-4523-833A-12C395908512Q26747130-320CD5B7-E470-4693-B10D-00DDA5A606BBQ26749162-9841A5FF-2DFE-4A82-8A4A-3AA59B48E335Q28833669-70D58663-343A-4901-A88B-19B7111229D4Q30375668-B0D3AF1A-7D9A-4DF9-AA53-40049361FD69Q30382732-33F0C3E9-5889-47BA-8F75-3B4E08301C25Q30392650-648538C7-22D8-466E-9EF4-147E3858B963Q30402785-54E4B34F-19BF-4B51-87E2-4B0B980FBAE9Q34861473-A7186171-C2A2-4FFB-B59E-0E2D06DA24C1Q35156860-63C81414-BF17-491A-A676-5004A79382A4Q35858462-4D839035-79BE-46CC-AB44-DB443382AABFQ36178342-F9D01C31-A039-4145-B530-1C1AAB79C567Q37232244-E92881FE-F99E-4240-9C41-D81D94FF6AD1Q38378623-B3171C88-0AE9-4611-8C82-A7BC2A11C032Q38497247-0BEEAC64-03F4-4025-B011-7A04EA8DF10DQ38501249-93DCF86B-9334-479F-9D74-9ED3FA7CFD5AQ38562942-DB387F5A-43E3-4D09-9157-788DDE7557AFQ38601579-F482AD77-1F11-40F8-A252-4B79EC811B00Q38785911-9BDC5E29-0A26-45FE-8F0D-6883F833A2BBQ39291879-09AA1C1F-53AF-489E-8D8E-9AC616B4AF88Q41165117-83281203-55CD-4357-8CBA-FE24E6BC66F0Q41361764-2B875EE7-4CC2-47C4-9668-A24C4388DF2CQ47132843-6BEADBB3-41B2-4126-9822-BFB594F52C62Q48053219-23005F6C-D8DC-4C95-8E40-B256372126B3Q48059314-778B0889-0038-4304-84A8-123CF0764369Q48139611-82DAA7D3-062B-4863-8BBF-8CD8C19DD922Q50620927-A691F2A2-C3BF-433F-9054-56E00A8D3747Q55445745-31E7F535-5719-4BFC-B250-2F49146AF131Q58781601-B62F033E-25EE-4934-A5BD-8F8E143F619E
P2860
Computational approaches to mapping allosteric pathways.
description
2014 nî lūn-bûn
@nan
2014 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2014 թվականի մարտին հրատարակված գիտական հոդված
@hy
2014年の論文
@ja
2014年論文
@yue
2014年論文
@zh-hant
2014年論文
@zh-hk
2014年論文
@zh-mo
2014年論文
@zh-tw
2014年论文
@wuu
name
Computational approaches to mapping allosteric pathways.
@ast
Computational approaches to mapping allosteric pathways.
@en
type
label
Computational approaches to mapping allosteric pathways.
@ast
Computational approaches to mapping allosteric pathways.
@en
prefLabel
Computational approaches to mapping allosteric pathways.
@ast
Computational approaches to mapping allosteric pathways.
@en
P2093
P2860
P1476
Computational approaches to mapping allosteric pathways
@en
P2093
Adam T Van Wart
Rommie E Amaro
Victoria A Feher
P2860
P304
P356
10.1016/J.SBI.2014.02.004
P577
2014-03-22T00:00:00Z