MetAMOS: a modular and open source metagenomic assembly and analysis pipeline. - Wikidata - wikimedia - TriplyDB

MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

http://www.wikidata.org/entity/Q33741975

about

Identification and Genomic Analysis of a Novel Group C Orthobunyavirus Isolated from a Mosquito Captured near Iquitos, Peru The Gastrointestinal Microbiome: Alcohol Effects on the Composition of Intestinal Microbiota Metagenomics: Retrospect and Prospects in High Throughput Age Insights into novel antimicrobial compounds and antibiotic resistance genes from soil metagenomes Integrative workflows for metagenomic analysis An introduction to the analysis of shotgun metagenomic data Host-Microbiome Interaction and Cancer: Potential Application in Precision Medicine Metagenomic Assembly: Overview, Challenges and Applications Next-Generation Sequencing: A Review of Technologies and Tools for Wound Microbiome Research A molecular portrait of maternal sepsis from Byzantine Troy Validation of high throughput sequencing and microbial forensics applications.Changes in the Structure of the Microbial Community Associated with Nannochloropsis salina following Treatments with Antibiotics and Bioactive Compounds Synthetic long-read sequencing reveals intraspecies diversity in the human microbiome Evidence of Archaeal Methanogens in Brain Abscess.Clinical PathoScope: rapid alignment and filtration for accurate pathogen identification in clinical samples using unassembled sequencing data.A scalable and accurate targeted gene assembly tool (SAT-Assembler) for next-generation sequencing data.Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies.Reconstructing 16S rRNA genes in metagenomic data.Anvi'o: an advanced analysis and visualization platform for 'omics data.MetaFast: fast reference-free graph-based comparison of shotgun metagenomic data.MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data Automated ensemble assembly and validation of microbial genomes.Kraken: ultrafast metagenomic sequence classification using exact alignments Assembling metagenomes, one community at a time.Comparative analysis of functional metagenomic annotation and the mappability of short reads.Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics Mapping the inner workings of the microbiome: genomic- and metagenomic-based study of metabolism and metabolic interactions in the human microbiome.Phylogenetics and the human microbiome Exploring variation-aware contig graphs for (comparative) metagenomics using MaryGold.Reconstructing the genomic content of microbiome taxa through shotgun metagenomic deconvolution.DIME: a novel framework for de novo metagenomic sequence assembly MetaID: a novel method for identification and quantification of metagenomic samples.Metaproteomics: extracting and mining proteome information to characterize metabolic activities in microbial communities.Insights from the metagenome of an acid salt lake: the role of biology in an extreme depositional environment.InteMAP: Integrated metagenomic assembly pipeline for NGS short reads Structure and function of the healthy pre-adolescent pediatric gut microbiome Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome.Subtractive assembly for comparative metagenomics, and its application to type 2 diabetes metagenomes.VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires.TruSPAdes: barcode assembly of TruSeq synthetic long reads.

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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

http://www.wikidata.org/entity/Q33741975

description

2013 nî lūn-bûn

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2013 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2013 թվականի հունվարին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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name

MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

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type

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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.

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Bo Liu

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Brian Ondov

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Daniel D Sommer

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Irina Astrovskaya

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Todd J Treangen

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P2860

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

Metabolic reconstruction for metagenomic data and its application to the human microbiome

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

State of the art de novo assembly of human genomes from massively parallel sequencing data

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

Minimus: a fast, lightweight genome assembler

SmashCommunity: a metagenomic annotation and analysis tool

Enterotypes of the human gut microbiome

Genome sequencing in microfabricated high-density picolitre reactors

Mapping copy number variation by population-scale genome sequencing

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1

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14

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Aaron Earl Darling

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2013-01-15T00:00:00Z

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open-source software

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