MoDEL (Molecular Dynamics Extended Library): a database of atomistic molecular dynamics trajectories.
about
Molecular dynamics simulations: advances and applicationsDesign and application of implicit solvent models in biomolecular simulationsBIGNASim: a NoSQL database structure and analysis portal for nucleic acids simulation dataExploring early stages of the chemical unfolding of proteins at the proteome scaleSSBD: a database of quantitative data of spatiotemporal dynamics of biological phenomenaDevelopment of an informatics infrastructure for data exchange of biomolecular simulations: Architecture, data models and ontologyWholeCellSimDB: a hybrid relational/HDF database for whole-cell model predictionsCABS-flex predictions of protein flexibility compared with NMR ensembles.Predicting Real-Valued Protein Residue Fluctuation Using FlexPred.Structural features that predict real-value fluctuations of globular proteinsExploring protein dynamics space: the dynasome as the missing link between protein structure and function.CABS-flex: Server for fast simulation of protein structure fluctuationsVisualizing time-related data in biology, a reviewIn pursuit of an accurate spatial and temporal model of biomolecules at the atomistic level: a perspective on computer simulation.Data model, dictionaries, and desiderata for biomolecular simulation data indexing and sharing.Structural basis for the recruitment and activation of the Legionella phospholipase VipD by the host GTPase Rab5.Defining the nature of thermal intermediate in 3 state folding proteins: apoflavodoxin, a study case.Polyphony: superposition independent methods for ensemble-based drug discovery.SEABED: Small molEcule activity scanner weB servicE baseD.Molecular dynamics trajectory compression with a coarse-grained model.Does changing the predicted dynamics of a phospholipase C alter activity and membrane binding?Understanding biomolecular motion, recognition, and allostery by use of conformational ensembles.A theoretical view of protein dynamics.Conformational plasticity of RepB, the replication initiator protein of promiscuous streptococcal plasmid pMV158.Exploring the complete mutational space of the LDL receptor LA5 domain using molecular dynamics: linking SNPs with disease phenotypes in familial hypercholesterolemia.Structural and energetic study of cation-π-cation interactions in proteins.Tetramerization-defects of p53 result in aberrant ubiquitylation and transcriptional activity.Gaussian network model can be enhanced by combining solvent accessibility in proteins.Characterization of the impact of alternative splicing on protein dynamics: the cases of glutathione S-transferase and ectodysplasin-A isoforms.Correlated motions are a fundamental property of β-sheets.Accelerating physical simulations of proteins by leveraging external knowledge.Geometric Detection Algorithms for Cavities on Protein Surfaces in Molecular Graphics: A Survey.Fluctuating Finite Element Analysis (FFEA): A continuum mechanics software tool for mesoscale simulation of biomolecules.MDWeb and MDMoby: an integrated web-based platform for molecular dynamics simulations.Protein dynamic communities from elastic network models align closely to the communities defined by molecular dynamics.Bioinformatic Software Developments in Spain
P2860
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P2860
MoDEL (Molecular Dynamics Extended Library): a database of atomistic molecular dynamics trajectories.
description
2010 nî lūn-bûn
@nan
2010 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
MoDEL (Molecular Dynamics Exte ...... lecular dynamics trajectories.
@ast
MoDEL (Molecular Dynamics Exte ...... lecular dynamics trajectories.
@en
type
label
MoDEL (Molecular Dynamics Exte ...... lecular dynamics trajectories.
@ast
MoDEL (Molecular Dynamics Exte ...... lecular dynamics trajectories.
@en
prefLabel
MoDEL (Molecular Dynamics Exte ...... lecular dynamics trajectories.
@ast
MoDEL (Molecular Dynamics Exte ...... lecular dynamics trajectories.
@en
P2093
P50
P1433
P1476
MoDEL (Molecular Dynamics Exte ...... lecular dynamics trajectories.
@en
P2093
Adam Hospital
Alberto Pérez
Carles Fenollosa
Carles Ferrer-Costa
Jordi Camps
Manuel Rueda
Modesto Orozco
P304
P356
10.1016/J.STR.2010.07.013
P577
2010-11-01T00:00:00Z