seqMINER: an integrated ChIP-seq data interpretation platform. - Wikidata - wikimedia - TriplyDB

seqMINER: an integrated ChIP-seq data interpretation platform.

seqMINER: an integrated ChIP-seq data interpretation platform.

http://www.wikidata.org/entity/Q33777909

about

Cistrome: an integrative platform for transcriptional regulation studies Trim33 Binds and Silences a Class of Young Endogenous Retroviruses in the Mouse Testis; a Novel Component of the Arms Race between Retrotransposons and the Host Genome Multimer Formation Explains Allelic Suppression of PRDM9 Recombination Hotspots A polycomb group protein is retained at specific sites on chromatin in mitosis Cell reprogramming requires silencing of a core subset of polycomb targets Chromatin-to-nucleoprotamine transition is controlled by the histone H2B variant TH2B Target gene analysis by microarrays and chromatin immunoprecipitation identifies HEY proteins as highly redundant bHLH repressors Pleiohomeotic interacts with the core transcription elongation factor Spt5 to regulate gene expression in Drosophila LANA binds to multiple active viral and cellular promoters and associates with the H3K4methyltransferase hSET1 complex Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations Bromodomain-dependent stage-specific male genome programming by Brdt Human Transcriptome and Chromatin Modifications: An ENCODE Perspective Rapid turnover of long noncoding RNAs and the evolution of gene expression The cancer-associated CTCFL/BORIS protein targets multiple classes of genomic repeats, with a distinct binding and functional preference for humanoid-specific SVA transposable elements Combinatorial epigenetic patterns as quantitative predictors of chromatin biology.Drug-induced histone eviction from open chromatin contributes to the chemotherapeutic effects of doxorubicin.Spark: a navigational paradigm for genomic data exploration STAR: an integrated solution to management and visualization of sequencing data.From human monocytes to genome-wide binding sites--a protocol for small amounts of blood: monocyte isolation/ChIP-protocol/library amplification/genome wide computational data analysis.ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases VAP: a versatile aggregate profiler for efficient genome-wide data representation and discovery Probabilistic partitioning methods to find significant patterns in ChIP-Seq data.Endoglin integrates BMP and Wnt signalling to induce haematopoiesis through JDP2.HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data.jChIP: a graphical environment for exploratory ChIP-Seq data analysis VisRseq: R-based visual framework for analysis of sequencing data.The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data.Novel roles for ERK5 and cofilin as critical mediators linking ERα-driven transcription, actin reorganization, and invasiveness in breast cancer.Prenatal Exposure to a Maternal High-Fat Diet Affects Histone Modification of Cardiometabolic Genes in Newborn Rats.The Cohesin Release Factor WAPL Restricts Chromatin Loop Extension Nucleosome positioning and histone modifications define relationships between regulatory elements and nearby gene expression in breast epithelial cells.The forkhead transcription factor FOXK2 acts as a chromatin targeting factor for the BAP1-containing histone deubiquitinase complex QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditions.Nucleosome eviction along with H3K9ac deposition enhances Sox2 binding during human neuroectodermal commitment.jMOSAiCS: joint analysis of multiple ChIP-seq datasets.Comparison of REST cistromes across human cell types reveals common and context-specific functions Mof-associated complexes have overlapping and unique roles in regulating pluripotency in embryonic stem cells and during differentiation.The quest for epigenetic regulation underlying unisexual flower development in Cucumis melo.MAPK-triggered chromatin reprogramming by histone deacetylase in plant innate immunity Genome-wide analysis of alpharetroviral integration in human hematopoietic stem/progenitor cells.

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P2860

seqMINER: an integrated ChIP-seq data interpretation platform.

http://www.wikidata.org/entity/Q33777909

description

2010 nî lūn-bûn

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2010 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի դեկտեմբերին հրատարակված գիտական հոդված

@hy

2010年の論文

@ja

2010年論文

@yue

2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

@zh-tw

2010年论文

@wuu

name

seqMINER: an integrated ChIP-seq data interpretation platform.

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seqMINER: an integrated ChIP-seq data interpretation platform.

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type

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seqMINER: an integrated ChIP-seq data interpretation platform.

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seqMINER: an integrated ChIP-seq data interpretation platform.

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prefLabel

seqMINER: an integrated ChIP-seq data interpretation platform.

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seqMINER: an integrated ChIP-seq data interpretation platform.

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Nucleic Acids Research

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seqMINER: an integrated ChIP-seq data interpretation platform.

@en

P2093

Celine Keime

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Frederic Plewniak

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Mohamed-Amin Choukrallah

http://www.w3.org/2001/XMLSchema#string

Tao Ye

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P2860

Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains

Model-based analysis of ChIP-Seq (MACS)

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Combinatorial patterns of histone acetylations and methylations in the human genome

The human genome browser at UCSC

DAVID: Database for Annotation, Visualization, and Integrated Discovery

LookSeq: A browser-based viewer for deep sequencing data

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

Control of developmental regulators by Polycomb in human embryonic stem cells

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10.1093/NAR/GKQ1287

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6

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3064796

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