Standing genetic variation in contingency loci drives the rapid adaptation of Campylobacter jejuni to a novel host. - Wikidata - wikimedia - TriplyDB

Standing genetic variation in contingency loci drives the rapid adaptation of Campylobacter jejuni to a novel host.

Standing genetic variation in contingency loci drives the rapid adaptation of Campylobacter jejuni to a novel host.

http://www.wikidata.org/entity/Q33808990

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High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates The role of variable DNA tandem repeats in bacterial adaptation Characterizing the Syphilis-Causing Treponema pallidum ssp. pallidum Proteome Using Complementary Mass Spectrometry Genome dynamics during experimental evolution Whole-Genome Sequencing in Epidemiology of Campylobacter jejuni Infections.Outcome of infection of C57BL/6 IL-10(-/-) mice with Campylobacter jejuni strains is correlated with genome content of open reading frames up- and down-regulated in vivo A framework for assessing the concordance of molecular typing methods and the true strain phylogeny of Campylobacter jejuni and C. coli using draft genome sequence data.The complete Campylobacter jejuni transcriptome during colonization of a natural host determined by RNAseq.High-throughput sequencing of Campylobacter jejuni insertion mutant libraries reveals mapA as a fitness factor for chicken colonization.The roles of standing genetic variation and evolutionary history in determining the evolvability of anti-predator strategies.Fitness is strongly influenced by rare mutations of large effect in a microbial mutation accumulation experiment.Comparative genomics of Helicobacter pylori and the human-derived Helicobacter bizzozeronii CIII-1 strain reveal the molecular basis of the zoonotic nature of non-pylori gastric Helicobacter infections in humans.Closely related Campylobacter jejuni strains from different sources reveal a generalist rather than a specialist lifestyle.Genome analysis of Campylobacter jejuni strains isolated from a waterborne outbreak.A variable homopolymeric G-repeat defines small RNA-mediated posttranscriptional regulation of a chemotaxis receptor in Helicobacter pylori.Draft genome sequences of two Campylobacter jejuni clinical isolates, NW and D2600.Phase variation of a Type IIG restriction-modification enzyme alters site-specific methylation patterns and gene expression in Campylobacter jejuni strain NCTC11168 Fisher's geometric model with a moving optimum.The transcriptional landscape of Campylobacter jejuni under iron replete and iron limited growth conditions.Comparative variation within the genome of Campylobacter jejuni NCTC 11168 in human and murine hosts High frequency, spontaneous motA mutations in Campylobacter jejuni strain 81-176.The CJIE1 prophage of Campylobacter jejuni affects protein expression in growth media with and without bile salts.Chlamydia trachomatis In Vivo to In Vitro Transition Reveals Mechanisms of Phase Variation and Down-Regulation of Virulence Factors A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions.Catch Me if You Can: Adaptation from Standing Genetic Variation to a Moving Phenotypic Optimum.High Throughput Method for Analysis of Repeat Number for 28 Phase Variable Loci of Campylobacter jejuni Strain NCTC11168.Comparative transcriptome analysis by RNAseq of necrotic enteritis Clostridium perfringens during in vivo colonization and in vitro conditions In-silico prediction and deep-DNA sequencing validation indicate phase variation in 115 Neisseria meningitidis genes.High-Frequency Variation of Purine Biosynthesis Genes Is a Mechanism of Success in Campylobacter jejuni.Generation and Screening of an Insertion Sequencing-Compatible Mutant Library of Campylobacter jejuni.Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population.Polyphosphate kinases modulate Campylobacter jejuni outer membrane constituents and alter its capacity to invade and survive in intestinal epithelial cells in vitro Passage of Campylobacter jejuni through the chicken reservoir or mice promotes phase variation in contingency genes Cj0045 and Cj0170 that strongly associates with colonization and disease in a mouse model.A "successful allele" at Campylobacter jejuni contingency locus Cj0170 regulates motility; "successful alleles" at locus Cj0045 are strongly associated with mouse colonization Darwinism for the Genomic Age: Connecting Mutation to Diversification.The role of CRISPR-Cas systems in virulence of pathogenic bacteria Following an imaginary Campylobacter population from farm to fork and beyond: a bacterial perspective.Genomic and global approaches to unravelling how hypermutable sequences influence bacterial pathogenesis.Genome-scale analysis of the non-cultivable Treponema pallidum reveals extensive within-patient genetic variation.Motility defects in Campylobacter jejuni defined gene deletion mutants caused by second-site mutations.

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Standing genetic variation in contingency loci drives the rapid adaptation of Campylobacter jejuni to a novel host.

http://www.wikidata.org/entity/Q33808990

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2011年の論文

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P2860

Genome evolution and adaptation in a long-term experiment with Escherichia coli

The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences

Switching of flagellar motility in Helicobacter pylori by reversible length variation of a short homopolymeric sequence repeat in fliP, a gene encoding a basal body protein

ZOOM! Zillions of oligos mapped

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

Primer3 on the WWW for general users and for biologist programmers

Slipped-strand mispairing: a major mechanism for DNA sequence evolution

Genome-wide mutational diversity in an evolving population of Escherichia coli

Comprehensive mutation identification in an evolved bacterial cooperator and its cheating ancestor

SSAHA: a fast search method for large DNA databases

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