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Large conformational changes in proteins: signaling and other functions.

Large conformational changes in proteins: signaling and other functions.

http://www.wikidata.org/entity/Q33837160

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A structure-based benchmark for protein-protein binding affinity Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics Dynamics, flexibility and ligand-induced conformational changes in biological macromolecules: a computational approach Novel allosteric sites on Ras for lead generation Conformational Changes in the Epidermal Growth Factor Receptor: Role of the Transmembrane Domain Investigated by Coarse-Grained MetaDynamics Free Energy Calculations The Peptide-Receptive Transition State of MHC Class I Molecules: Insight from Structure and Molecular Dynamics Crystal Structures and Kinetics of Monofunctional Proline Dehydrogenase Provide Insight into Substrate Recognition and Conformational Changes Associated with Flavin Reduction and Product Release Mutation D816V alters the internal structure and dynamics of c-KIT receptor cytoplasmic region: implications for dimerization and activation mechanisms Identification of potential small molecule binding pockets on Rho family GTPases How Intrinsic Molecular Dynamics Control Intramolecular Communication in Signal Transducers and Activators of Transcription Factor STAT5 DNA Polymerase Conformational Dynamics and the Role of Fidelity-Conferring Residues: Insights from Computational Simulations A network of molecular switches controls the activation of the two-component response regulator NtrC.Sampling Enrichment toward Target Structures Using Hybrid Molecular Dynamics-Monte Carlo Simulations.Detection of Side Chain Rearrangements Mediating the Motions of Transmembrane Helices in Molecular Dynamics Simulations of G Protein-Coupled Receptors.Coarse-Grained Models for Protein-Cell Membrane Interactions.An optimal distance cutoff for contact-based Protein Structure Networks using side-chain centers of mass.Frustration, specific sequence dependence, and nonlinearity in large-amplitude fluctuations of allosteric proteins.Coupling Protein Dynamics with Proton Transport in Human Carbonic Anhydrase II.ClustENM: ENM-Based Sampling of Essential Conformational Space at Full Atomic Resolution.Computational insights for the discovery of non-ATP competitive inhibitors of MAP kinases relaxGUI: a new software for fast and simple NMR relaxation data analysis and calculation of ps-ns and μs motion of proteins.Conformational Transition Pathways of Epidermal Growth Factor Receptor Kinase Domain from Multiple Molecular Dynamics Simulations and Bayesian Clustering.The role of conserved waters in conformational transitions of Q61H K-ras.Role of dynamics in the autoinhibition and activation of the exchange protein directly activated by cyclic AMP (EPAC)Comparison of tertiary structures of proteins in protein-protein complexes with unbound forms suggests prevalence of allostery in signalling proteins.Capturing transition paths and transition states for conformational rearrangements in the ribosome.Implementation of Accelerated Molecular Dynamics in NAMD Disruption of Bcr-Abl coiled coil oligomerization by design.Discovery of novel checkpoint kinase 1 inhibitors by virtual screening based on multiple crystal structures Nucleotide-dependent mechanism of Get3 as elucidated from free energy calculations.Simultaneous analysis of enzyme structure and activity by kinetic capillary electrophoresis-MS.Overview of simulation studies on the enzymatic activity and conformational dynamics of the GTPase Ras.Oncogenic K-Ras Binds to an Anionic Membrane in Two Distinct Orientations: A Molecular Dynamics Analysis.Biomolecular dynamics: order-disorder transitions and energy landscapes Transition path theory analysis of c-Src kinase activation Single-Molecule Analysis of Cytochrome c Folding by Monitoring the Lifetime of an Attached Fluorescent Probe.Mapping the structural and dynamical features of kinesin motor domains Collective variable approaches for single molecule flexible fitting and enhanced sampling.Biomolecularmodeling and simulation: a field coming of age.Molecular mechanisms of drug resistance in tyrosine kinases cAbl and cKit.

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P2860

Large conformational changes in proteins: signaling and other functions.

http://www.wikidata.org/entity/Q33837160

description

2010 nî lūn-bûn

@nan

2010 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2010年の論文

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2010年論文

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2010年論文

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2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

@zh-tw

2010年论文

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name

Large conformational changes in proteins: signaling and other functions.

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Large conformational changes in proteins: signaling and other functions.

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type

label

Large conformational changes in proteins: signaling and other functions.

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Large conformational changes in proteins: signaling and other functions.

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prefLabel

Large conformational changes in proteins: signaling and other functions.

@ast

Large conformational changes in proteins: signaling and other functions.

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Q33837160-FF382151-A416-478F-9CA3-01060069DB26

P356

J.SBI.2009.12.004

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Current Opinion in Structural Biology

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Large conformational changes in proteins: signaling and other functions.

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P2093

Alemayehu A Gorfe

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Barry J Grant

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P2860

A novel switch region regulates H-ras membrane orientation and signal output

A conserved protonation-dependent switch controls drug binding in the Abl kinase

Ras conformational switching: simulating nucleotide-dependent conformational transitions with accelerated molecular dynamics

Structural mechanism for STI-571 inhibition of abelson tyrosine kinase

Equally Potent Inhibition of c-Src and Abl by Compounds that Recognize Inactive Kinase Conformations

The conformational plasticity of protein kinases

The guanine nucleotide-binding switch in three dimensions

Dynamics of folded proteins

Efficacy and safety of a specific inhibitor of the BCR-ABL tyrosine kinase in chronic myeloid leukemia

Ras oncogenes: split personalities

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142-147

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scholarly article

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10.1016/J.SBI.2009.12.004

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2

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20

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J. Andrew McCammon

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2010-01-08T00:00:00Z

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40898457

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20060708

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2866511

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