Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout.
about
Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model speciesEvaluating adaptive divergence between migratory and nonmigratory ecotypes of a salmonid fish, Oncorhynchus mykissGenotyping of whole genome amplified reduced representation libraries reveals a cryptic population of Culicoides brevitarsis in the Northern Territory, AustraliaSpatially Explicit Analysis of Genome-Wide SNPs Detects Subtle Population Structure in a Mobile Marine Mammal, the Harbor Porpoise.Phylogeny of Morella rubra and Its Relatives (Myricaceae) and Genetic Resources of Chinese Bayberry Using RAD SequencingSingle nucleotide polymorphism discovery in cutthroat trout subspecies using genome reduction, barcoding, and 454 pyro-sequencingTwo different high throughput sequencing approaches identify thousands of de novo genomic markers for the genetically depleted Bornean elephantHow do SNP ascertainment schemes and population demographics affect inferences about population history?Genetic identification of F1 and post-F1 serrasalmid juvenile hybrids in Brazilian aquacultureGenomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencingTranscriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales.Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation.Special features of RAD Sequencing data: implications for genotyping.Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes.Reference-free SNP discovery for the Eurasian beaver from restriction site-associated DNA paired-end data.Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae)SNP development from RNA-seq data in a nonmodel fish: how many individuals are needed for accurate allele frequency prediction?Applicability of RAD-tag genotyping for interfamilial comparisons: empirical data from two cetaceans.Defining loci in restriction-based reduced representation genomic data from nonmodel species: sources of bias and diagnostics for optimal clusteringIncorporating evolutionary processes into population viability models.Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles.Unidirectional diploid-tetraploid introgression among British birch trees with shifting ranges shown by restriction site-associated markersSNP discovery using Next Generation Transcriptomic Sequencing in Atlantic herring (Clupea harengus)Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping-by-sequencing data from natural populations.Assessing patterns of hybridization between North Atlantic eels using diagnostic single-nucleotide polymorphisms.Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing.Footprints of domestication revealed by RAD-tag resequencing in loquat: SNP data reveals a non-significant domestication bottleneck and a single domestication event.Next-generation hybridization and introgression.RAD tag sequencing as a source of SNP markers in Cynara cardunculus L.Reference genome-independent assessment of mutation density using restriction enzyme-phased sequencing.Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon.Genome sequence of dwarf birch (Betula nana) and cross-species RAD markers.Harnessing genomics for delineating conservation units.Estimates of genetic differentiation measured by F(ST) do not necessarily require large sample sizes when using many SNP markersGene duplication, population genomics, and species-level differentiation within a tropical mountain shrubRank and order: evaluating the performance of SNPs for individual assignment in a non-model organism.Hybrid zones, barrier loci and the 'rare allele phenomenon'.Genetics and genomics of disease resistance in salmonid speciesDevelopment of SNP markers identifying European wildcats, domestic cats, and their admixed progeny.Rapid, economical single-nucleotide polymorphism and microsatellite discovery based on de novo assembly of a reduced representation genome in a non-model organism: a case study of Atlantic cod Gadus morhua.
P2860
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P2860
Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout.
description
2011 nî lūn-bûn
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2011 թուականի Մարտին հրատարակուած գիտական յօդուած
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2011 թվականի մարտին հրատարակված գիտական հոդված
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2011年の論文
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2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
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2011年論文
@zh-tw
2011年论文
@wuu
name
Next-generation RAD sequencing ...... and westslope cutthroat trout.
@ast
Next-generation RAD sequencing ...... and westslope cutthroat trout.
@en
type
label
Next-generation RAD sequencing ...... and westslope cutthroat trout.
@ast
Next-generation RAD sequencing ...... and westslope cutthroat trout.
@en
prefLabel
Next-generation RAD sequencing ...... and westslope cutthroat trout.
@ast
Next-generation RAD sequencing ...... and westslope cutthroat trout.
@en
P2093
P2860
P1476
Next-generation RAD sequencing ...... and westslope cutthroat trout.
@en
P2093
Fred W Allendorf
Julian M Catchen
Paul A Hohenlohe
Stephen J Amish
P2860
P304
P356
10.1111/J.1755-0998.2010.02967.X
P478
11 Suppl 1
P577
2011-03-01T00:00:00Z