Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species. - Wikidata - wikimedia - TriplyDB

Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species.

Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species.

http://www.wikidata.org/entity/Q33868778

about

Ralstonia syzygii, the Blood Disease Bacterium and some Asian R. solanacearum strains form a single genomic species despite divergent lifestyles Patterns of gene flow define species of thermophilic Archaea The different ecological niches of enterotoxigenic Escherichia coli Ordering microbial diversity into ecologically and genetically cohesive units Microbial source tracking markers for detection of fecal contamination in environmental waters: relationships between pathogens and human health outcomes Insights into the evolution of pathogenicity of Escherichia coli from genomic analysis of intestinal E. coli of Marmota himalayana in Qinghai-Tibet plateau of China Genomic diversity of Escherichia isolates from diverse habitats Seasonal and genotypic changes in escherichia coli phylogenetic groups in the Yeongsan River basin of South Korea Virulence factor activity relationships (VFARs): a bioinformatics perspective.Origins of pandemic Vibrio cholerae from environmental gene pools.Genomic heterogeneity and ecological speciation within one subspecies of Bacillus subtilis Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts.Urinary tract infections attributed to diverse ExPEC strains in food animals: evidence and data gaps.Phylogenetically typing bacterial strains from partial SNP genotypes observed from direct sequencing of clinical specimen metagenomic data.Faecal microbiota transplant for recurrent Clostridium difficile infection using long-term frozen stool is effective: clinical efficacy and bacterial viability data.Culture independent analysis using gnd as a target gene to assess Escherichia coli diversity and community structure.Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States.Bacterial species may exist, metagenomics reveal.Phylogenetic incongruence in E. coli O104: understanding the evolutionary relationships of emerging pathogens in the face of homologous recombination.Quartet decomposition server: a platform for analyzing phylogenetic trees Evolutionary history of the Clostridium difficile pathogenicity locus Phylogenetic distribution of traits associated with plant colonization in Escherichia coli.Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes.Quantitative analysis of persister fractions suggests different mechanisms of formation among environmental isolates of E. coli.Comparisons of infant Escherichia coli isolates link genomic profiles with adaptation to the ecological niche.A phyletically rare gene promotes the niche-specific fitness of an E. coli pathogen during bacteremia.Comparative genomics of Wolbachia and the bacterial species concept.Constraints on genome dynamics revealed from gene distribution among the Ralstonia solanacearum species.Context-dependent competition in a model gut bacterial community Adhesion of marine cryptic Escherichia isolates to human intestinal epithelial cells.Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains.Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea.Genotypic and phenotypic characterization of Escherichia coli isolates from feces, hands, and soils in rural Bangladesh via the Colilert Quanti-Tray System.SNP-associations and phenotype predictions from hundreds of microbial genomes without genome alignments Ecological consistency of SSU rRNA-based operational taxonomic units at a global scale.Influence of Land Use, Nutrients, and Geography on Microbial Communities and Fecal Indicator Abundance at Lake Michigan Beaches.Understanding the association of Escherichia coli with diverse macroalgae in the lagoon of Venice.Novel recA-Independent Horizontal Gene Transfer in Escherichia coli K-12.Rethinking "mutualism" in diverse host-symbiont communities.Implications of Genome-Based Discrimination between Clostridium botulinum Group I and Clostridium sporogenes Strains for Bacterial Taxonomy

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Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species.

http://www.wikidata.org/entity/Q33868778

description

2011 nî lūn-bûn

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2011年の論文

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2011年論文

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Chengwei Luo

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David M Gordon

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Konstantinos T Konstantinidis

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Michael Feldgarden

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Seth T Walk

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P2860

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

Genetic exchange across a species boundary in the archaeal genus ferroplasma

A human gut microbial gene catalogue established by metagenomic sequencing

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

Fuzzy species among recombinogenic bacteria

Clustal W and Clustal X version 2.0

A codon-based model of nucleotide substitution for protein-coding DNA sequences

KaKs_Calculator: calculating Ka and Ks through model selection and model averaging

Cryptic lineages of the genus Escherichia

Sex and virulence in Escherichia coli: an evolutionary perspective

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