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Simrank: Rapid and sensitive general-purpose k-mer search tool

Simrank: Rapid and sensitive general-purpose k-mer search tool

http://www.wikidata.org/entity/Q33882868

about

Probabilistic topic modeling for the analysis and classification of genomic sequences Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys.Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs The Gut Microbiotassay: a high-throughput qPCR approach combinable with next generation sequencing to study gut microbial diversity.Comparative genomics of oral isolates of Streptococcus mutans by in silico genome subtraction does not reveal accessory DNA associated with severe early childhood caries.Fast discovery and visualization of conserved regions in DNA sequences using quasi-alignment.Biodiversity hot spot on a hot spot: novel extremophile diversity in Hawaiian fumaroles.Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica Superstatistical model of bacterial DNA architecture.Experimental metagenomics and ribosomal profiling of the human skin microbiome.

P2860

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P2860

Simrank: Rapid and sensitive general-purpose k-mer search tool

http://www.wikidata.org/entity/Q33882868

description

2011 nî lūn-bûn

@nan

2011 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի ապրիլին հրատարակված գիտական հոդված

@hy

2011年の論文

@ja

2011年論文

@yue

2011年論文

@zh-hant

2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

@zh-tw

2011年论文

@wuu

name

Simrank: Rapid and sensitive general-purpose k-mer search tool

@ast

Simrank: Rapid and sensitive general-purpose k-mer search tool

@en

type

label

Simrank: Rapid and sensitive general-purpose k-mer search tool

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Simrank: Rapid and sensitive general-purpose k-mer search tool

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prefLabel

Simrank: Rapid and sensitive general-purpose k-mer search tool

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Simrank: Rapid and sensitive general-purpose k-mer search tool

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Simrank: Rapid and sensitive general-purpose k-mer search tool

@en

P2093

Keith Keller

http://www.w3.org/2001/XMLSchema#string

Navjeet N S Singh

http://www.w3.org/2001/XMLSchema#string

Niels Larsen

http://www.w3.org/2001/XMLSchema#string

Todd Z DeSantis

http://www.w3.org/2001/XMLSchema#string

Ulas Karaoz

http://www.w3.org/2001/XMLSchema#string

P2860

Topographical and temporal diversity of the human skin microbiome

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

Basic local alignment search tool

Bacterial community in the crop of the hoatzin, a neotropical folivorous flying bird

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

Search and clustering orders of magnitude faster than BLAST

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

SSAHA: a fast search method for large DNA databases

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

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11

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Gary L Andersen

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