Soil-specific limitations for access and analysis of soil microbial communities by metagenomics.
about
Emerging spatial patterns in Antarctic prokaryotesA modular method for the extraction of DNA and RNA, and the separation of DNA pools from diverse environmental sample typesUnder-detection of endospore-forming Firmicutes in metagenomic dataKey players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers.Understanding microbial community diversity metrics derived from metagenomes: performance evaluation using simulated data sets.Micro-scale determinants of bacterial diversity in soil.Changes in diversity, abundance, and structure of soil bacterial communities in Brazilian Savanna under different land use systems.Metagenomic analysis of a tropical composting operation at the são paulo zoo park reveals diversity of biomass degradation functions and organismsThe effect of primer choice and short read sequences on the outcome of 16S rRNA gene based diversity studies.Soil-borne bacterial structure and diversity does not reflect community activity in Pampa biome.Shifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics.Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts.Distinct summer and winter bacterial communities in the active layer of Svalbard permafrost revealed by DNA- and RNA-based analyses.The influence of surface soil physicochemistry on the edaphic bacterial communities in contrasting terrain types of the Central Namib Desert.Accurate read-based metagenome characterization using a hierarchical suite of unique signatures.Strong spurious transcription likely contributes to DNA insert bias in typical metagenomic clone librariesComparative Analysis of Prokaryotic Communities Associated with Organic and Conventional Farming Systems.Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed.A decade of metaproteomics: where we stand and what the future holds.Sensitive life detection strategies for low-biomass environments: optimizing extraction of nucleic acids adsorbing to terrestrial and Mars analogue minerals.Bacterial and archaeal communities in long-term contaminated surface and subsurface soil evaluated through coextracted RNA and DNA.Size Matters: Assessing Optimum Soil Sample Size for Fungal and Bacterial Community Structure Analyses Using High Throughput Sequencing of rRNA Gene Amplicons.Oligotyping reveals stronger relationship of organic soil bacterial community structure with N-amendments and soil chemistry in comparison to that of mineral soil at Harvard Forest, MA, USASuccessive DNA extractions improve characterization of soil microbial communities.Profiling soil microbial communities with next-generation sequencing: the influence of DNA kit selection and technician technical expertise.Metagenomics: novel enzymes from non-culturable microbes.Old meets new: most probable number validation of metagenomic and metatranscriptomic datasets in soil.Studies of plant colonisation by closely related Bacillus amyloliquefaciens biocontrol agents using strain specific quantitative PCR assays.Comparison of two bacterial DNA extraction methods from non-polluted and polluted soils.Novel Tools for the Functional Expression of Metagenomic DNA.An efficient and cost-effective method for DNA extraction from athalassohaline soil using a newly formulated cell extraction buffer.Effects of fertilizations on soil bacteria and fungi communities in a degraded arid steppe revealed by high through-put sequencing.Bacterial community structures in rhizosphere microsites of ryegrass (Lolium perenne var. Nui) as revealed by pyrosequencingBacterial community structure and detection of putative plant growth-promoting rhizobacteria associated with plants grown in Chilean agro-ecosystems and undisturbed ecosystemsDirect and indirect effects of climate change on soil microbial and soil microbial-plant interactions: What lies ahead?Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges RemainFactors affecting soil microbial biomass and functional diversity with the application of organic amendments in three contrasting cropland soils during a field experiment
P2860
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P2860
Soil-specific limitations for access and analysis of soil microbial communities by metagenomics.
description
2011 nî lūn-bûn
@nan
2011 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Soil-specific limitations for ...... l communities by metagenomics.
@ast
Soil-specific limitations for ...... l communities by metagenomics.
@en
type
label
Soil-specific limitations for ...... l communities by metagenomics.
@ast
Soil-specific limitations for ...... l communities by metagenomics.
@en
prefLabel
Soil-specific limitations for ...... l communities by metagenomics.
@ast
Soil-specific limitations for ...... l communities by metagenomics.
@en
P2093
P2860
P1476
Soil-specific limitations for ...... l communities by metagenomics.
@en
P2093
Emmanuel Prestat
Nathalie Lombard
Pascal Simonet
P2860
P356
10.1111/J.1574-6941.2011.01140.X
P577
2011-06-28T00:00:00Z