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Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement

Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement

http://www.wikidata.org/entity/Q34013904

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Genome-scale reconstruction and analysis of the metabolic network in the hyperthermophilic archaeon Sulfolobus solfataricus A constraint-based model of Scheffersomyces stipitis for improved ethanol production Evaluation of a genome-scale in silico metabolic model for Geobacter metallireducens by using proteomic data from a field biostimulation experiment.Genome-scale metabolic network reconstruction and in silico flux analysis of the thermophilic bacterium Thermus thermophilus HB27.Comprehensive reconstruction and evaluation of Pichia pastoris genome-scale metabolic model that accounts for 1243 ORFs.Model based engineering of Pichia pastoris central metabolism enhances recombinant protein production Acorn: a grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks via a web interface Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in silico evaluation of their potentials Genome sequence and analysis of methylotrophic yeast Hansenula polymorpha DL1.(Post-)genomics approaches in fungal research.Validation of an FBA model for Pichia pastoris in chemostat cultures.Systems-level organization of yeast methylotrophic lifestyle.Reconstruction and analysis of a genome-scale metabolic model for Scheffersomyces stipitis.Integration and Validation of the Genome-Scale Metabolic Models of Pichia pastoris: A Comprehensive Update of Protein Glycosylation Pathways, Lipid and Energy Metabolism SILAC compatible strain of Pichia pastoris for expression of isotopically labeled protein standards and quantitative proteomics.Integrated isotope-assisted metabolomics and (13)C metabolic flux analysis reveals metabolic flux redistribution for high glucoamylase production by Aspergillus niger Dynamic genome-scale metabolic modeling of the yeast Pichia pastoris Network motifs provide signatures that characterize metabolism.Combined 13C-assisted metabolomics and metabolic flux analysis reveals the impacts of glutamate on the central metabolism of high β-galactosidase-producing Pichia pastoris.Eukaryotic metabolism: measuring compartment fluxes.Protein secretion in Pichia pastoris and advances in protein production.Metabolic reconstruction and flux analysis of industrial Pichia yeasts.Pichia pastoris: protein production host and model organism for biomedical research.New opportunities by synthetic biology for biopharmaceutical production in Pichia pastoris.Toward systems metabolic engineering of Aspergillus and Pichia species for the production of chemicals and biofuels.Improving functional annotation for industrial microbes: a case study with Pichia pastoris.Optimizing eukaryotic cell hosts for protein production through systems biotechnology and genome-scale modeling.Metabolic modeling to identify engineering targets for Komagataella phaffii: The effect of biomass composition on gene target identification.Recent advances of molecular toolbox construction expand Pichia pastoris in synthetic biology applications.Overexpressing target helper genes enhances secretion and glycosylation of recombinant proteins in Pichia pastoris under simulated microgravity.Metabolic flux profiling of recombinant protein secreting Pichia pastoris growing on glucose:methanol mixtures.Computational identification of adaptive mutants using the VERT system.Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization.Genome-scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis.Glucose-methanol co-utilization in Pichia pastoris studied by metabolomics and instationary ¹³C flux analysis.Principal elementary mode analysis (PEMA).Reconstruction and visualization of carbohydrate, N-glycosylation pathways in Pichia pastoris CBS7435 using computational and system biology approaches.Reduced quenching and extraction time for mammalian cells using filtration and syringe extraction.Development of quantitative metabolomics for Pichia pastoris.Quantitative metabolomics analysis of amino acid metabolism in recombinant Pichia pastoris under different oxygen availability conditions.

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Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement

http://www.wikidata.org/entity/Q34013904

description

2010 nî lūn-bûn

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2010 թուականի Յուլիսին հրատարակուած գիտական յօդուած

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2010 թվականի հուլիսին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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name

Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Microbial Cell Factories

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Genome-scale metabolic reconst ...... astoris for strain improvement

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Bevan Ks Chung

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Camattari Andrea

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Dong-Yup Lee

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Hongweon Lee

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Hyeokweon Lee

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Jimyoung Ryu

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Jungoh Ahn

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Suresh Selvarasu

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The ENZYME database in 2000

From genomics to chemical genomics: new developments in KEGG

Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009

Global reconstruction of the human metabolic network based on genomic and bibliomic data

Applications of genome-scale metabolic reconstructions.

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

Reconstruction of biochemical networks in microorganisms

Intracellular functions of N-linked glycans

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10.1186/1475-2859-9-50

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9

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2908565

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