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Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

http://www.wikidata.org/entity/Q34075015

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Use of Genomic Tools to Improve Cattle Health in the Context of Infectious Diseases Dominant Red Coat Color in Holstein Cattle Is Associated with a Missense Mutation in the Coatomer Protein Complex, Subunit Alpha (COPA) Gene Genome-Wide Detection of CNVs and Their Association with Meat Tenderness in Nelore Cattle Genome-wide analysis reveals signatures of selection for important traits in domestic sheep from different ecoregions Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes Massively parallel sequencing of Chikso (Korean brindle cattle) to discover genome-wide SNPs and InDels Massive screening of copy number population-scale variation in Bos taurus genome Single nucleotide polymorphism analysis of Korean native chickens using next generation sequencing data.Integration of transcriptome and whole genomic resequencing data to identify key genes affecting swine fat deposition Evolutionary Analyses of Hanwoo (Korean Cattle)-Specific Single-Nucleotide Polymorphisms and Genes Using Whole-Genome Resequencing Data of a Hanwoo Population Whole-genome analyses of Korean native and Holstein cattle breeds by massively parallel sequencing.Association study and expression analysis of CYP4A11 gene copy number variation in Chinese cattle Deleted copy number variation of Hanwoo and Holstein using next generation sequencing at the population level.Detection of copy number variations and their effects in Chinese bulls Genome-wide patterns of standing genetic variation in a marine population of three-spined sticklebacks.Whole genome SNP discovery and analysis of genetic diversity in Turkey (Meleagris gallopavo).Whole-Genome Resequencing Analysis of Hanwoo and Yanbian Cattle to Identify Genome-Wide SNPs and Signatures of Selection.Mutation discovery for Mendelian traits in non-laboratory animals: a review of achievements up to 2012.Copy number variants in locally raised Chinese chicken genomes determined using array comparative genomic hybridization Gene-based single nucleotide polymorphism discovery in bovine muscle using next-generation transcriptomic sequencing.Assessment of the genomic variation in a cattle population by re-sequencing of key animals at low to medium coverage Sequencing and annotated analysis of the Holstein cow genome.Whole-genome resequencing of Hanwoo (Korean cattle) and insight into regions of homozygosity.Identification of Pyrus single nucleotide polymorphisms (SNPs) and evaluation for genetic mapping in European pear and interspecific Pyrus hybrids Sequencing and annotated analysis of full genome of Holstein breed bull.Runs of homozygosity and distribution of functional variants in the cattle genome Genome-Wide Study of Structural Variants in Bovine Holstein, Montbéliarde and Normande Dairy Breeds.Genomic population structure and prevalence of copy number variations in South African Nguni cattle.Whole-genome sequencing of the endangered bovine species Gayal (Bos frontalis) provides new insights into its genetic features.Genome-wide identification of copy number variation using high-density single-nucleotide polymorphism array in Japanese Black cattle.Impact of Parental Bos taurus and Bos indicus Origins on Copy Number Variation in Traditional Chinese Cattle Breeds.Whole genome sequencing of Guzerá cattle reveals genetic variants in candidate genes for production, disease resistance, and heat tolerance.Whole-Genome Resequencing of Holstein Bulls for Indel Discovery and Identification of Genes Associated with Milk Composition Traits in Dairy Cattle.The assessment of inter-individual variation of whole-genome DNA sequence in 32 cows Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds CNV discovery for milk composition traits in dairy cattle using whole genome resequencing.Low-depth genotyping-by-sequencing (GBS) in a bovine population: strategies to maximize the selection of high quality genotypes and the accuracy of imputation.Genome-wide identification of copy number variations in Chinese Holstein.The identification of candidate genes and SNP markers for classical bovine spongiform encephalopathy susceptibility.Genetic Diversity Analysis of South and East Asian Duck Populations Using Highly Polymorphic Microsatellite Markers.

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Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

http://www.wikidata.org/entity/Q34075015

description

2011 nî lūn-bûn

@nan

2011 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@ast

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@en

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@nl

type

label

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@ast

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@en

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@nl

prefLabel

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@ast

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@en

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

@nl

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1471-2164-12-559

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Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

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Jennifer M Sumner-Thomson

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Jung-Woo Choi

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Stephen S Moore

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Urmila Basu

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Xiaoping Liao

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Yan Meng

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P2860

BLAST+: architecture and applications

The genome sequence of taurine cattle: a window to ruminant biology and evolution

Gene ontology: tool for the unification of biology

Database resources of the National Center for Biotechnology Information

Ongoing and future developments at the Universal Protein Resource

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds

Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding

Bias of selection on human copy-number variants.

Reduced purifying selection prevails over positive selection in human copy number variant evolution

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559

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scholarly article

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10.1186/1471-2164-12-559

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12

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2011-11-15T00:00:00Z

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22085807

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3229636

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