Pepitome: evaluating improved spectral library search for identification complementarity and quality assessment. - Wikidata - wikimedia - TriplyDB

Pepitome: evaluating improved spectral library search for identification complementarity and quality assessment.

Pepitome: evaluating improved spectral library search for identification complementarity and quality assessment.

http://www.wikidata.org/entity/Q34118228

about

Proteogenomic characterization of human colon and rectal cancer Current algorithmic solutions for peptide-based proteomics data generation and identification QC metrics from CPTAC raw LC-MS/MS data interpreted through multivariate statistics How to submit MS proteomics data to ProteomeXchange via the PRIDE database.Tracking the sources of blood meals of parasitic arthropods using shotgun proteomics and unidentified tandem mass spectral libraries JUMP: a tag-based database search tool for peptide identification with high sensitivity and accuracy.Identifying sources of tick blood meals using unidentified tandem mass spectral libraries.Spectral library generating function for assessing spectrum-spectrum match significance Refining similarity scoring to enable decoy-free validation in spectral library searching.Refining spectral library searching.Proteomic analysis of colon and rectal carcinoma using standard and customized databases Spectral library searching in proteomics.A Description of the Clinical Proteomic Tumor Analysis Consortium (CPTAC) Common Data Analysis Pipeline.Assembly Dynamics and Stoichiometry of the Apoptosis Signal-regulating Kinase (ASK) Signalosome in Response to Electrophile Stress.Recognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets.Quantitative proteomics signature profiling based on network contextualization.QuaMeter: multivendor performance metrics for LC-MS/MS proteomics instrumentation.Basophile: accurate fragment charge state prediction improves peptide identification rates.Software eyes for protein post-translational modifications.Tandem mass spectral libraries of peptides and their roles in proteomics research.Chronic intermittent alcohol disrupts the GluN2B-associated proteome and specifically regulates group I mGlu receptor-dependent long-term depression.Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics.

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P2860

Pepitome: evaluating improved spectral library search for identification complementarity and quality assessment.

http://www.wikidata.org/entity/Q34118228

description

2012 nî lūn-bûn

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2012 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2012 թվականի հունվարին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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Pepitome: evaluating improved ...... tarity and quality assessment.

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Pepitome: evaluating improved ...... tarity and quality assessment.

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Journal of Proteome Research

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Pepitome: evaluating improved ...... tarity and quality assessment.

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P2093

Amy-Joan L Ham

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Kristin L Carpenter

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Lorenzo J Vega-Montoto

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Matthew C Chambers

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Misti A Martinez

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Surendra Dasari

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P2860

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

TopHat: discovering splice junctions with RNA-Seq

MyriMatch: highly accurate tandem mass spectral peptide identification by multivariate hypergeometric analysis

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics.

Mass spectrometric protein identification using the global proteome machine.

Method to compare collision-induced dissociation spectra of peptides: potential for library searching and subtractive analysis.

Using annotated peptide mass spectrum libraries for protein identification.

Development and validation of a spectral library searching method for peptide identification from MS/MS.

Using BiblioSpec for creating and searching tandem MS peptide libraries.

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