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PASSEL: the PeptideAtlas SRMexperiment library

PASSEL: the PeptideAtlas SRMexperiment library

http://www.wikidata.org/entity/Q34154235

about

Exploring the potential of public proteomics data Applications of targeted proteomics in systems biology and translational medicine Mass spectrometry for translational proteomics: progress and clinical implications Identifying novel biomarkers through data mining-a realistic scenario?PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases Multiple evidence strands suggest that there may be as few as 19,000 human protein-coding genes Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome A Golden Age for Working with Public Proteomics Data Mass Spectrometric-Based Selected Reaction Monitoring of Protein Phosphorylation during Symbiotic Signaling in the Model Legume, Medicago truncatula The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition 2016 update of the PRIDE database and its related tools Development of data representation standards by the human proteome organization proteomics standards initiative Making proteomics data accessible and reusable: current state of proteomics databases and repositories Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013 ProteomeXchange provides globally coordinated proteomics data submission and dissemination The next level of complexity: crosstalk of posttranslational modifications.Automated selected reaction monitoring data analysis workflow for large-scale targeted proteomic studies.How to submit MS proteomics data to ProteomeXchange via the PRIDE database.DIANA--algorithmic improvements for analysis of data-independent acquisition MS data.Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1.Data sources for in vivo molecular profiling of human phenotypes.Proteomic Data Storage and Sharing.Proteogenomic convergence for understanding cancer pathways and networks.CPTAC Assay Portal: a repository of targeted proteomic assays.Panorama: a targeted proteomics knowledge base Systems cell biology.Parallel reaction monitoring for high resolution and high mass accuracy quantitative, targeted proteomics.Quantitative proteomic analysis reveals effects of epidermal growth factor receptor (EGFR) on invasion-promoting proteins secreted by glioblastoma cells.Reproducible quantification of cancer-associated proteins in body fluids using targeted proteomics.Kinetic analysis of BCL11B multisite phosphorylation-dephosphorylation and coupled sumoylation in primary thymocytes by multiple reaction monitoring mass spectroscopy.The Mtb proteome library: a resource of assays to quantify the complete proteome of Mycobacterium tuberculosis.Using PeptideAtlas, SRMAtlas, and PASSEL: Comprehensive Resources for Discovery and Targeted Proteomics.YPED: an integrated bioinformatics suite and database for mass spectrometry-based proteomics research.Representation of selected-reaction monitoring data in the mzQuantML data standard.Targeted proteomics: a bridge between discovery and validation.Non-invasive prognostic protein biomarker signatures associated with colorectal cancer.Prediction of colorectal cancer diagnosis based on circulating plasma proteins jPOSTrepo: an international standard data repository for proteomes

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P2860

PASSEL: the PeptideAtlas SRMexperiment library

http://www.wikidata.org/entity/Q34154235

description

2012 nî lūn-bûn

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2012 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի ապրիլին հրատարակված գիտական հոդված

@hy

2012年の論文

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2012年論文

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2012年論文

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2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

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2012年论文

@wuu

name

PASSEL: the PeptideAtlas SRMexperiment library

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PASSEL: the PeptideAtlas SRMexperiment library

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PASSEL: the PeptideAtlas SRMexperiment library

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type

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PASSEL: the PeptideAtlas SRMexperiment library

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PASSEL: the PeptideAtlas SRMexperiment library

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PASSEL: the PeptideAtlas SRMexperiment library

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prefLabel

PASSEL: the PeptideAtlas SRMexperiment library

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PASSEL: the PeptideAtlas SRMexperiment library

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PASSEL: the PeptideAtlas SRMexperiment library

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PASSEL: the PeptideAtlas SRMexperiment library

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David S Campbell

http://www.w3.org/2001/XMLSchema#string

Luis Mendoza

http://www.w3.org/2001/XMLSchema#string

Mi-Youn Brusniak

http://www.w3.org/2001/XMLSchema#string

Nathalie Selevsek

http://www.w3.org/2001/XMLSchema#string

Ralph Schiess

http://www.w3.org/2001/XMLSchema#string

Richard Kreisberg

http://www.w3.org/2001/XMLSchema#string

Robert L Moritz

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Ruth Hüttenhain

http://www.w3.org/2001/XMLSchema#string

Terry Farrah

http://www.w3.org/2001/XMLSchema#string

Zhi Sun

http://www.w3.org/2001/XMLSchema#string

P2860

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

The PeptideAtlas project

Mass spectrometry-based proteomics

A common open representation of mass spectrometry data and its application to proteomics research

mzML--a community standard for mass spectrometry data

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

A guided tour of the Trans-Proteomic Pipeline

Open source system for analyzing, validating, and storing protein identification data.

MRMer, an interactive open source and cross-platform system for data extraction and visualization of multiple reaction monitoring experiments

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1170-1175

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scholarly article

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10.1002/PMIC.201100515

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P433

8

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12

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Ulrike Kusebauch

Ruedi Aebersold

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2012-04-01T00:00:00Z

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221817785

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22318887

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3832291

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