A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics.
about
The probabilistic convolution tree: efficient exact Bayesian inference for faster LC-MS/MS protein inferenceQuasispecies in population of compositional assembliesThe effect of using an inappropriate protein database for proteomic data analysisProteomic tools to decipher microbial community structure and functioningMass spectrometry for translational proteomics: progress and clinical implicationsA tutorial for software development in quantitative proteomics using PSI standard formatsImproved False Discovery Rate Estimation Procedure for Shotgun ProteomicsCardiovascular proteomics in the era of big data: experimental and computational advancesLearning from decoys to improve the sensitivity and specificity of proteomics database search resultsDemonstration of Protein-Based Human Identification Using the Hair Shaft ProteomeDevelopment of data representation standards by the human proteome organization proteomics standards initiativeTrans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informaticsProteogenomics: concepts, applications and computational strategiesComputational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experimentsProteomics and systems biology for understanding diabetic nephropathyECL: an exhaustive search tool for the identification of cross-linked peptides using whole databaseUnraveling Massive Crocins Transport and Accumulation through Proteome and Microscopy Tools during the Development of Saffron Stigma.Enhanced peptide quantification using spectral count clustering and cluster abundance.Analyzing protein-protein interactions from affinity purification-mass spectrometry data with SAINTCurrent algorithmic solutions for peptide-based proteomics data generation and identificationProteomics and the analysis of proteomic data: 2013 overview of current protein-profiling technologies.customProDB: an R package to generate customized protein databases from RNA-Seq data for proteomics search.MSDA, a proteomics software suite for in-depth Mass Spectrometry Data Analysis using grid computing.Bioinformatic analysis of proteomics data.DeMix workflow for efficient identification of cofragmented peptides in high resolution data-dependent tandem mass spectrometry.New glycoproteomics software, GlycoPep Evaluator, generates decoy glycopeptides de novo and enables accurate false discovery rate analysis for small data sets.DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomicsNavigating through metaproteomics data: a logbook of database searching.A Scalable Approach for Protein False Discovery Rate Estimation in Large Proteomic Data Sets.Ranking Fragment Ions Based on Outlier Detection for Improved Label-Free Quantification in Data-Independent Acquisition LC-MS/MS.Untargeted, spectral library-free analysis of data-independent acquisition proteomics data generated using Orbitrap mass spectrometers.Metaproteomic data analysis at a glance: advances in computational microbial community proteomics.Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1.Mapping Biological Networks from Quantitative Data-Independent Acquisition Mass Spectrometry: Data to Knowledge Pipelines.Proteomic identification of monoclonal antibodies from serumUnderstanding the improved sensitivity of spectral library searching over sequence database searching in proteomics data analysis.Abacus: a computational tool for extracting and pre-processing spectral count data for label-free quantitative proteomic analysisImprovements in proteomic metrics of low abundance proteins through proteome equalization using ProteoMiner prior to MudPIT.NeuroPedia: neuropeptide database and spectral libraryiProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates
P2860
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P2860
A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics.
description
2010 nî lūn-bûn
@nan
2010 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
A survey of computational meth ...... ication in shotgun proteomics.
@ast
A survey of computational meth ...... ication in shotgun proteomics.
@en
A survey of computational meth ...... ication in shotgun proteomics.
@nl
type
label
A survey of computational meth ...... ication in shotgun proteomics.
@ast
A survey of computational meth ...... ication in shotgun proteomics.
@en
A survey of computational meth ...... ication in shotgun proteomics.
@nl
prefLabel
A survey of computational meth ...... ication in shotgun proteomics.
@ast
A survey of computational meth ...... ication in shotgun proteomics.
@en
A survey of computational meth ...... ication in shotgun proteomics.
@nl
P2860
P1476
A survey of computational meth ...... ication in shotgun proteomics.
@en
P2860
P304
P356
10.1016/J.JPROT.2010.08.009
P577
2010-09-08T00:00:00Z