Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation. - Wikidata - wikimedia - TriplyDB

Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation.

Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation.

http://www.wikidata.org/entity/Q34241325

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Genome-wide chromatin remodeling identified at GC-rich long nucleosome-free regions ATR-like kinase Mec1 facilitates both chromatin accessibility at DNA replication forks and replication fork progression during replication stress.Genome-wide nucleosome positioning during embryonic stem cell development Genome-wide mapping of yeast RNA polymerase II termination Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle.The effect of micrococcal nuclease digestion on nucleosome positioning data.Terminate and make a loop: regulation of transcriptional directionality.Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast.Nucleosome positioning: resources and tools online.Analysis of biological features associated with meiotic recombination hot and cold spots in Saccharomyces cerevisiae Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions.An effect of DNA sequence on nucleosome occupancy and removal.Nucleosome free regions in yeast promoters result from competitive binding of transcription factors that interact with chromatin modifiers.Identification of a role for histone H2B ubiquitylation in noncoding RNA 3'-end formation through mutational analysis of Rtf1 in Saccharomyces cerevisiae Differential patterns of intronic and exonic DNA regions with respect to RNA polymerase II occupancy, nucleosome density and H3K36me3 marking in fission yeast The Roles of the Paf1 Complex and Associated Histone Modifications in Regulating Gene Expression Micrococcal nuclease does not substantially bias nucleosome mapping.Histone H3R2 symmetric dimethylation and histone H3K4 trimethylation are tightly correlated in eukaryotic genomes.Transcriptional activation of yeast genes disrupts intragenic nucleosome phasing.Exploration of nucleosome positioning patterns in transcription factor function.Determinants of nucleosome positioning Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A.Z replacement.Independent RNA polymerase II preinitiation complex dynamics and nucleosome turnover at promoter sites in vivo Global analysis of mRNA isoform half-lives reveals stabilizing and destabilizing elements in yeast.Simultaneous mapping of transcript ends at single-nucleotide resolution and identification of widespread promoter-associated non-coding RNA governed by TATA elements.Unravelling the means to an end: RNA polymerase II transcription termination.Nucleosome positioning in Saccharomyces cerevisiae.Identifying and mitigating bias in next-generation sequencing methods for chromatin biology.MNase-Sensitive Complexes in Yeast: Nucleosomes and Non-histone Barriers.Nonspecific transcription-factor-DNA binding influences nucleosome occupancy in yeast.Establishing nucleosome architecture and stability at promoters: Roles of pioneer transcription factors and the RSC chromatin remodeler.A map of nucleosome positions in yeast at base-pair resolution.A unified model for yeast transcript definition.A functional evolutionary approach to identify determinants of nucleosome positioning: a unifying model for establishing the genome-wide pattern.A pre-initiation complex at the 3'-end of genes drives antisense transcription independent of divergent sense transcription.Topoisomerases, chromatin and transcription termination.Stable and dynamic nucleosome states during a meiotic developmental process.Gene promoters dictate histone occupancy within genes.The Ground State and Evolution of Promoter Region Directionality.Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning.

P2860

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P2860

Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation.

http://www.wikidata.org/entity/Q34241325

description

2010 nî lūn-bûn

@nan

2010 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հոտեմբերին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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name

Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

@ast

Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

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Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

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type

label

Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

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Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

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Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

@nl

prefLabel

Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

@ast

Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

@en

Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

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PNAS.1012674107

P1433

Proceedings of the National Academy of Sciences of the United States of America

P1476

Nucleosome depletion at yeast ...... sm linked to 3'-end formation.

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P2093

Kevin Struhl

http://www.w3.org/2001/XMLSchema#string

X Shirley Liu

http://www.w3.org/2001/XMLSchema#string

Xiaochun Fan

http://www.w3.org/2001/XMLSchema#string

Yi Jin

http://www.w3.org/2001/XMLSchema#string

Zarmik Moqtaderi

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P2860

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

A genomic code for nucleosome positioning

A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications

Dissecting the regulatory circuitry of a eukaryotic genome

Bidirectional promoters generate pervasive transcription in yeast

Transitions in RNA polymerase II elongation complexes at the 3' ends of genes

Model-based analysis of tiling-arrays for ChIP-chip.

Distinct modes of regulation by chromatin encoded through nucleosome positioning signals

High-resolution nucleosome mapping reveals transcription-dependent promoter packaging.

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17945-17950

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2964211

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