CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization. - Wikidata - wikimedia - TriplyDB

CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

http://www.wikidata.org/entity/Q34314401

about

A promising hypothesis of c-KIT methylation/ expression paradox in c-KIT (+) squamous cell carcinoma of uterine cervix ----- CTCF transcriptional repressor regulates c-KIT proto-oncogene expression CTCF Recruits Centromeric Protein CENP-E to the Pericentromeric/Centromeric Regions of Chromosomes through Unusual CTCF-Binding Sites The 2013 Nucleic Acids Research Database Issue and the online molecular biology database collection.Deconvolution of Ensemble Chromatin Interaction Data Reveals the Latent Mixing Structures in Cell Subpopulations Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse An imprinted non-coding genomic cluster at 14q32 defines clinically relevant molecular subtypes in osteosarcoma across multiple independent datasets.PARP1 restricts Epstein Barr Virus lytic reactivation by binding the BZLF1 promoter Common genetic variants influence human subcortical brain structures Characterization of constitutive CTCF/cohesin loci: a possible role in establishing topological domains in mammalian genomes.NuChart: an R package to study gene spatial neighbourhoods with multi-omics annotations.The Human GATA1 Gene Retains a 5' Insulator That Maintains Chromosomal Architecture and GATA1 Expression Levels in Splenic Erythroblasts Genome-Wide Profiling of PARP1 Reveals an Interplay with Gene Regulatory Regions and DNA Methylation.Epigenetic regulation of differential HLA-A allelic expression levels.The dual specificity phosphatase 2 gene is hypermethylated in human cancer and regulated by epigenetic mechanisms Epigenetic silencing of the XAF1 gene is mediated by the loss of CTCF binding.Loss of cohesin complex components STAG2 or STAG3 confers resistance to BRAF inhibition in melanoma.Insecticide resistance mediated by an exon skipping event.DNA methylation and differentiation: silencing, upregulation and modulation of gene expression.Epigenetic regulation of the Igf2/H19 gene cluster.Jointly characterizing epigenetic dynamics across multiple human cell types.Links between DNA methylation and nucleosome occupancy in the human genome.A dynamic CTCF chromatin binding landscape promotes DNA hydroxymethylation and transcriptional induction of adipocyte differentiation Novel CTCF binding at a site in exon1A of BCL6 is associated with active histone marks and a transcriptionally active locus.Spectral identification of topological domains.SNP-mediated disruption of CTCF binding at the IFITM3 promoter is associated with risk of severe influenza in humans.Epstein-Barr Virus Rta-Mediated Accumulation of DNA Methylation Interferes with CTCF Binding in both Host and Viral Genomes.DNA methylation dynamics of a maternally methylated DMR in the mouse Dlk1-Dio3 domain.Epigenetics of the myotonic dystrophy-associated DMPK gene neighborhood.CTCF and Rad21 act as host cell restriction factors for Kaposi's sarcoma-associated herpesvirus (KSHV) lytic replication by modulating viral gene transcription.Utilizing networks for differential analysis of chromatin interactions.Foamy Virus Vector Carries a Strong Insulator in Its Long Terminal Repeat Which Reduces Its Genotoxic Potential.Identification and characterization of two functional variants in the human longevity gene FOXO3.Selective inhibition of CTCF binding by iAs directs TET-mediated reprogramming of 5-hydroxymethylation patterns in iAs-transformed cells.A proximity-based graph clustering method for the identification and application of transcription factor clusters.Association studies of WD repeat domain 3 and chitobiosyldiphosphodolichol beta-mannosyltransferase genes with schizophrenia in a Japanese population.A Deconvolution Protocol for ChIP-Seq Reveals Analogous Enhancer Structures on the Mouse and Human Ribosomal RNA Genes.The dual effects of the astrocyte-specific enhancer of the AQP4 M1 promoter.Genome-wide computational analysis of potential long noncoding RNA mediated DNA:DNA:RNA triplexes in the human genome.Association between dementia and vascular disease-associated polymorphisms in a Tunisian population.Identification and validation of colorectal neoplasia-specific methylation biomarkers based on CTCF-binding sites.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

http://www.wikidata.org/entity/Q34314401

description

2012 nî lūn-bûn

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2012 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

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2012 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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name

CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

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Nucleic Acids Research

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CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization

@en

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Anindya Bhattacharya

http://www.w3.org/2001/XMLSchema#string

Jesse D Ziebarth

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A user's guide to the encyclopedia of DNA elements (ENCODE)

An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes

CTCF physically links cohesin to chromatin

A gene atlas of the mouse and human protein-encoding transcriptomes

High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

CTCF: master weaver of the genome

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

CTCFBSDB: a CTCF-binding site database for characterization of vertebrate genomic insulators

Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains

The human genome browser at UCSC

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10.1093/NAR/GKS1165

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Database issue

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41

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