Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data. - Wikidata - wikimedia - TriplyDB

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

http://www.wikidata.org/entity/Q34333346

about

Epigenome-wide Association Studies and the Interpretation of Disease -Omics Base resolution methylome profiling: considerations in platform selection, data preprocessing and analysis Epigenome data release: a participant-centered approach to privacy protection Decelerated genome evolution in modern vertebrates revealed by analysis of multiple lancelet genomes Base-resolution profiling of active DNA demethylation using MAB-seq and caMAB-seq Identification of active regulatory regions from DNA methylation data.MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data.Comprehensive analysis of DNA methylation data with RnBeads.BS-SNPer: SNP calling in bisulfite-seq data.CRCDA--Comprehensive resources for cancer NGS data analysis.MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data.Statistical challenges in analyzing methylation and long-range chromosomal interaction data epiG: statistical inference and profiling of DNA methylation from whole-genome bisulfite sequencing data.Genetic-epigenetic interactions in cis: a major focus in the post-GWAS era Characterization of genome-methylome interactions in 22 nuclear pedigrees.Epigenetic regulation of lateralized fetal spinal gene expression underlies hemispheric asymmetries Evolution of DNA methylation is linked to genetic aberrations in chronic lymphocytic leukemia MethylPurify: tumor purity deconvolution and differential methylation detection from single tumor DNA methylomes Global loss of DNA methylation uncovers intronic enhancers in genes showing expression changes.Dynamic evolution of clonal epialleles revealed by methclone.Single-base resolution analysis of active DNA demethylation using methylase-assisted bisulfite sequencing.Genome-wide assays that identify and quantify modified cytosines in human disease studies The role of DNA methylation in directing the functional organization of the cancer epigenome.Human cytomegalovirus drives epigenetic imprinting of the IFNG locus in NKG2Chi natural killer cells.DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation.Gender-specific postnatal demethylation and establishment of epigenetic memory Post-conversion targeted capture of modified cytosines in mammalian and plant genomes.Imprinted expression in cystic embryoid bodies shows an embryonic and not an extra-embryonic pattern Dissecting the role of aberrant DNA methylation in human leukaemia.Epigenomic analysis of the HOX gene loci reveals mechanisms that may control canonical expression patterns in AML and normal hematopoietic cells.Independent genomewide screens identify the tumor suppressor VTRNA2-1 as a human epiallele responsive to periconceptional environment SMAP: a streamlined methylation analysis pipeline for bisulfite sequencing Genome-wide nucleosome occupancy and DNA methylation profiling of four human cell lines.A Bayesian Assignment Method for Ambiguous Bisulfite Short Reads Characterization of functional methylomes by next-generation capture sequencing identifies novel disease-associated variants.Indel detection from RNA-seq data: tool evaluation and strategies for accurate detection of actionable mutations.Recent and dynamic transposable elements contribute to genomic divergence under asexuality.Epigenetic and genetic alterations and their influence on gene regulation in chronic lymphocytic leukemia.Whole-genome bisulfite sequencing maps from multiple human tissues reveal novel CpG islands associated with tissue-specific regulation Population whole-genome bisulfite sequencing across two tissues highlights the environment as the principal source of human methylome variation.

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Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

http://www.wikidata.org/entity/Q34333346

description

2012 nî lūn-bûn

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2012 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի հուլիսին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

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2012年論文

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2012年论文

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name

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@ast

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@en

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@nl

type

label

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@ast

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@en

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@nl

prefLabel

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@ast

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@en

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

@nl

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Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.

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Kimberly D Siegmund

http://www.w3.org/2001/XMLSchema#string

Peter W Laird

http://www.w3.org/2001/XMLSchema#string

Yaping Liu

http://www.w3.org/2001/XMLSchema#string

P2860

Genome-scale DNA methylation maps of pluripotent and differentiated cells

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

Human DNA methylomes at base resolution show widespread epigenomic differences

Mapping short DNA sequencing reads and calling variants using mapping quality scores

A new method for accurate assessment of DNA quality after bisulfite treatment

Analysis of repetitive element DNA methylation by MethyLight.

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

The Sequence Alignment/Map format and SAMtools

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

Epigenome-wide association studies for common human diseases

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gb-2012-13-7-r61

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scholarly article

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10.1186/GB-2012-13-7-R61

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7

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13

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Benjamin P Berman

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2012-07-11T00:00:00Z

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22784381

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DNA methylation

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3491382

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