An integrated pipeline for de novo assembly of microbial genomes - Wikidata - wikimedia - TriplyDB

An integrated pipeline for de novo assembly of microbial genomes

An integrated pipeline for de novo assembly of microbial genomes

http://www.wikidata.org/entity/Q34426729

about

Population and genomic analysis of the genus Halorubrum Vibrio vulnificus Type 6 Secretion System 1 Contains Anti-Bacterial Properties Epidemiology of extended-spectrum β-lactamase producing Escherichia coli in the stools of returning Japanese travelers, and the risk factors for colonization Carbapenem-Resistant Bacteria Recovered from Faeces of Dairy Cattle in the High Plains Region of the USA Swabs to genomes: a comprehensive workflow Draft genome sequences of eight bacteria isolated from the indoor environment: Staphylococcus capitis strain H36, S. capitis strain H65, S. cohnii strain H62, S. hominis strain H69, Microbacterium sp. strain H83, ...The complexity and diversity of the Pathogenicity Locus in Clostridium difficile clade 5 Klebsiella pneumoniae carbapenemase (KPC)-producing K. pneumoniae at a single institution: insights into endemicity from whole-genome sequencing.Streptomyces thermoautotrophicus does not fix nitrogen Genetic characterization of clinical and environmental Vibrio parahaemolyticus from the Northeast USA reveals emerging resident and non-indigenous pathogen lineages Deriving group A Streptococcus typing information from short-read whole-genome sequencing data Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium Determining Streptococcus suis serotype from short-read whole-genome sequencing data Streptococcus mitis strains causing severe clinical disease in cancer patients.Automated ensemble assembly and validation of microbial genomes.Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples.In silico Prediction, in vitro Antibacterial Spectrum, and Physicochemical Properties of a Putative Bacteriocin Produced by Lactobacillus rhamnosus Strain L156.4.Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis.A Syst-OMICS Approach to Ensuring Food Safety and Reducing the Economic Burden of Salmonellosis.Differential β-glucosidase expression as a function of carbon source availability in Talaromyces amestolkiae: a genomic and proteomic approach.Genome Sequence of Bacillus thuringiensis subsp. kurstaki Strain HD-1 A draft genome of Escherichia coli sequence type 127 strain 2009-46 Aerobic biodegradation of 2,4-Dinitroanisole by Nocardioides sp. strain JS1661.Genome Sequences of Klebsiella variicola Isolates from Dairy Animals with Bovine Mastitis from Newfoundland, Canada.Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response.The genome of Clostridium difficile 5.3.Draft Genome Sequence of Coxiella burnetii Strain Cb196, an Agent of Endocarditis in Saudi Arabia.Kingella kingae KK247, an Atypical Pulsed-Field Gel Electrophoresis Clone A Strain.Genetic characterization and comparison of Clostridium botulinum isolates from botulism cases in Japan between 2006 and 2011.Draft Genome Sequences of Escherichia coli Strains Isolated from Septic Patients.Draft Genome Sequence of Lactobacillus casei Lbs2.Genomer--a Swiss army knife for genome scaffolding A cost-effective method for high-throughput construction of illumina sequencing libraries.Assembling single-cell genomes and mini-metagenomes from chimeric MDA products Molecular evolution of the VP1, VP2, and VP3 genes in human rhinovirus species C.Draft Genome Sequence of Exopolysaccharide-Producing Cyanobacterium Aphanocapsa montana BDHKU 210001.RNA shotgun metagenomic sequencing of northern California (USA) mosquitoes uncovers viruses, bacteria, and fungi Population structure and antimicrobial resistance of invasive serotype IV group B Streptococcus, Toronto, Ontario, Canada Whole genome sequencing of extended-spectrum β-lactamase producing Klebsiella pneumoniae isolated from a patient in Lebanon.Two Draft Genome Sequences of a New Serovar of Salmonella enterica, Serovar Lubbock.

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An integrated pipeline for de novo assembly of microbial genomes

http://www.wikidata.org/entity/Q34426729

description

2012 nî lūn-bûn

@nan

2012 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

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2012年論文

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2012年论文

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name

An integrated pipeline for de novo assembly of microbial genomes

@ast

An integrated pipeline for de novo assembly of microbial genomes

@en

An integrated pipeline for de novo assembly of microbial genomes

@nl

type

label

An integrated pipeline for de novo assembly of microbial genomes

@ast

An integrated pipeline for de novo assembly of microbial genomes

@en

An integrated pipeline for de novo assembly of microbial genomes

@nl

prefLabel

An integrated pipeline for de novo assembly of microbial genomes

@ast

An integrated pipeline for de novo assembly of microbial genomes

@en

An integrated pipeline for de novo assembly of microbial genomes

@nl

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An integrated pipeline for de novo assembly of microbial genomes

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Andrew Tritt

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Marc T Facciotti

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P2860

The complete genome sequence of Haloferax volcanii DS2, a model archaeon

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

Fast and accurate short read alignment with Burrows-Wheeler transform

De novo assembly of human genomes with massively parallel short read sequencing

Mauve: multiple alignment of conserved genomic sequence with rearrangements

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

Scaffolding pre-assembled contigs using SSPACE

Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition

Genome assembly forensics: finding the elusive mis-assembly.

TagDust--a program to eliminate artifacts from next generation sequencing data.

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9

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Jonathan A. Eisen

Aaron Earl Darling

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