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Reference-based compression of short-read sequences using path encoding

Reference-based compression of short-read sequences using path encoding

http://www.wikidata.org/entity/Q34461173

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Novel bioinformatic developments for exome sequencing Data-dependent bucketing improves reference-free compression of sequencing reads Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph.Quark enables semi-reference-based compression of RNA-seq data.ARSDA: A New Approach for Storing, Transmitting and Analyzing Transcriptomic Data.Optimal compressed representation of high throughput sequence data via light assembly.BdBG: a bucket-based method for compressing genome sequencing data with dynamic de Bruijn graphs

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Reference-based compression of short-read sequences using path encoding

http://www.wikidata.org/entity/Q34461173

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2015 nî lūn-bûn

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2015 թուականի Փետրուարին հրատարակուած գիտական յօդուած

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2015 թվականի փետրվարին հրատարակված գիտական հոդված

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2015年の論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年论文

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name

Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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prefLabel

Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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Reference-based compression of short-read sequences using path encoding

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Carl Kingsford

http://www.w3.org/2001/XMLSchema#string

Rob Patro

http://www.w3.org/2001/XMLSchema#string

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Compression of FASTQ and SAM format sequencing data

An Eulerian path approach to DNA fragment assembly

Efficient storage of high throughput DNA sequencing data using reference-based compression

Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes

Fast and accurate short read alignment with Burrows-Wheeler transform

The Sequence Alignment/Map format and SAMtools

SCALCE: boosting sequence compression algorithms using locally consistent encoding

QualComp: a new lossy compressor for quality scores based on rate distortion theory

Compressing genomic sequence fragments using SlimGene

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1920-1928

http://www.w3.org/2001/XMLSchema#string

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scholarly article

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10.1093/BIOINFORMATICS/BTV071

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12

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31

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2015-02-02T00:00:00Z

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25649622

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