An integrative variant analysis pipeline for accurate genotype/haplotype inference in population NGS data
about
Genotyping-by-sequencing for Populus population genomics: an assessment of genome sampling patterns and filtering approachesComparative primate genomics: emerging patterns of genome content and dynamicsSparse whole-genome sequencing identifies two loci for major depressive disorderThe genome of the clonal raider ant Cerapachys biroiThe population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequencesA primer for disease gene prioritization using next-generation sequencing dataPopulation genetic analysis of bi-allelic structural variants from low-coverage sequence data with an expectation-maximization algorithm.Construction and analysis of high-density linkage map using high-throughput sequencing dataANGSD: Analysis of Next Generation Sequencing Data.An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data.Likelihood-based complex trait association testing for arbitrary depth sequencing data.Fast imputation using medium or low-coverage sequence data.Reveel: large-scale population genotyping using low-coverage sequencing data.A reference panel of 64,976 haplotypes for genotype imputation.Extremely low-coverage whole genome sequencing in South Asians captures population genomics information.Haplotype estimation using sequencing reads.Large multiallelic copy number variations in humansIntegrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel.Translating RNA sequencing into clinical diagnostics: opportunities and challenges.Comprehensive variation discovery in single human genomes.Whole-genome haplotyping approaches and genomic medicine.Comparing variant calling algorithms for target-exon sequencing in a large samplePopulation genomic analysis of 962 whole genome sequences of humans reveals natural selection in non-coding regions.A hybrid computational strategy to address WGS variant analysis in >5000 samples.Genomic Variants Associated with Resistance to High Fat Diet Induced Obesity in a Primate Model.SNP-based heritability estimates of the personality dimensions and polygenic prediction of both neuroticism and major depression: findings from CONVERGE.11,670 whole-genome sequences representative of the Han Chinese population from the CONVERGE project.GeneImp: Fast Imputation to Large Reference Panels Using Genotype Likelihoods from Ultralow Coverage Sequencing.A missense mutation in TCN2 is associated with decreased risk for congenital heart defects and may increase cellular uptake of vitamin B12 via Megalin.Variability in a Short Tandem Repeat Mediates Complex Epistatic Interactions in Arabidopsis thaliana.High-Density Genetic Map Construction and Stem Total Polysaccharide Content-Related QTL Exploration for Chinese Endemic Dendrobium (Orchidaceae).Ancient DNA from Giant Panda (Ailuropoda melanoleuca) of South-Western China Reveals Genetic Diversity Loss during the Holocene.Insects with similar social complexity show convergent patterns of adaptive molecular evolution.Allele-specific epigenome maps reveal sequence-dependent stochastic switching at regulatory loci
P2860
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P2860
An integrative variant analysis pipeline for accurate genotype/haplotype inference in population NGS data
description
2013 nî lūn-bûn
@nan
2013 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
An integrative variant analysi ...... ference in population NGS data
@ast
An integrative variant analysi ...... ference in population NGS data
@en
An integrative variant analysi ...... ference in population NGS data
@nl
type
label
An integrative variant analysi ...... ference in population NGS data
@ast
An integrative variant analysi ...... ference in population NGS data
@en
An integrative variant analysi ...... ference in population NGS data
@nl
prefLabel
An integrative variant analysi ...... ference in population NGS data
@ast
An integrative variant analysi ...... ference in population NGS data
@en
An integrative variant analysi ...... ference in population NGS data
@nl
P2093
P2860
P356
P1433
P1476
An integrative variant analysi ...... ference in population NGS data
@en
P2093
P2860
P304
P356
10.1101/GR.146084.112
P50
P577
2013-01-07T00:00:00Z