Microbial contamination in next generation sequencing: implications for sequence-based analysis of clinical samples. - Wikidata - wikimedia - TriplyDB

Microbial contamination in next generation sequencing: implications for sequence-based analysis of clinical samples.

Microbial contamination in next generation sequencing: implications for sequence-based analysis of clinical samples.

http://www.wikidata.org/entity/Q34550120

about

Genome Sequence of Dengue virus 3 from the Pythium insidiosum Transcriptomes Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies Parasite infection of public databases: a data mining approach to identify apicomplexan contaminations in animal genome and transcriptome assemblies.Viral Encephalitis of Unknown Cause: Current Perspective and Recent Advances.Three distinct pneumotypes characterize the microbiome of the lung in BALB/cJ mice Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project.The tumor virus landscape of AIDS-related lymphomas Propionibacterium acnes: Disease-Causing Agent or Common Contaminant? Detection in Diverse Patient Samples by Next-Generation Sequencing.Composition, taxonomy and functional diversity of the oropharynx microbiome in individuals with schizophrenia and controls Vecuum: identification and filtration of false somatic variants caused by recombinant vector contamination.Human Contamination in Public Genome Assemblies Validation of picogram- and femtogram-input DNA libraries for microscale metagenomics.Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.The blood DNA virome in 8,000 humans.Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing Performance of 16s rDNA Primer Pairs in the Study of Rhizosphere and Endosphere Bacterial Microbiomes in Metabarcoding Studies.Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling.Advanced Characterization of DNA Molecules in rAAV Vector Preparations by Single-stranded Virus Next-generation Sequencing.Next-generation sequencing diagnostics of bacteremia in septic patients.A comprehensive next generation sequencing-based virome assessment in brain tissue suggests no major virus - tumor association.Microbial bioinformatics 2020.Identification of Viruses in Cases of Pediatric Acute Encephalitis and Encephalopathy Using Next-Generation Sequencing.Tumour virology in the era of high-throughput genomics.Towards a universal molecular microbiological test.Sensitivity of Next-Generation Sequencing Metagenomic Analysis for Detection of RNA and DNA Viruses in Cerebrospinal Fluid: The Confounding Effect of Background Contamination.Editors' Pick: Contamination has always been the issue!Expanding the conversation on high-throughput virome sequencing standards to include consideration of microbial contamination sources.Decontaminating eukaryotic genome assemblies with machine learning.Recent insights into the tick microbiome gained through next-generation sequencing.Next-generation sequencing diagnostics of bacteremia in sepsis (Next GeneSiS-Trial): Study protocol of a prospective, observational, noninterventional, multicenter, clinical trial.ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues.Viromic Analysis of Wastewater Input to a River Catchment Reveals a Diverse Assemblage of RNA Viruses.Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia.Horizontally transferred genes in the ctenophore Mnemiopsis leidyi.MetaMap: an atlas of metatranscriptomic reads in human disease-related RNA-seq data.Metagenomic Composition Analysis of an Ancient Sequenced Polar Bear Jawbone from Svalbard

P2860

Q26314628-C4874A37-946A-4043-98F5-B71F607B38AA Q27300126-AC36371E-9F1F-4048-8CBA-C5D77634CF76 Q31155417-497CB99E-BF6F-433E-AD97-5E9A5A52425A Q32183334-EC562E6B-8017-4CF0-B8A6-FFFD77B7B54C Q33880637-9730A04C-C891-4849-B15C-8DF32975BA16 Q34525149-21384B4F-6236-4BF2-88BF-B517E51997CD Q34992696-87A111E2-8E44-4E0C-B6F1-37D3F1D6E53E Q35607311-9964C362-292B-4450-A1D6-0E30928C420E Q35906411-C57D2A10-2931-4F18-BA8F-FD347AF13AF1 Q36015531-A5C6211B-B987-44AB-8569-F1827C604DF0 Q36059296-89623EE4-0660-4095-9622-AB0F688B4BB7 Q36128019-4364A8B4-6259-454E-926C-32D293E7CE3C Q36149529-1DCDB7FD-7E5B-420F-943A-1E2365236D60 Q36256376-B0CD8B56-7A6A-488F-8FD1-675ACEE5B77E Q36318304-BFC0243B-B710-4D9D-8B2F-FCEF408C3E69 Q36334602-B77CEB52-0263-4003-8D38-8A90A814D316 Q36896837-5A0A5A90-630A-44CD-8157-4B09C3D14D14 Q36937525-F763A835-B3CA-4AD9-A16C-CBAD2C291AE4 Q36939744-05627CCC-77F1-4271-A900-0BD63D69303D Q37059591-46B38CCF-423F-4DDB-A49F-82FEFDE067B2 Q37085029-9691F124-84D8-47AF-9782-6E08C27CE5E1 Q37194003-156ACB35-0DF3-4933-B330-DCA9213E1DF0 Q37254444-E344DE12-D5F1-4D35-82EA-203213EDC6F0 Q40046673-4D87180B-1195-44A5-BAE9-15EFA3B8FD62 Q40073039-185C0AD9-AEE3-435D-A5EF-72A82C8708DE Q40616341-85CC80E5-173C-4871-971A-A93158307F8D Q42222080-83FDFF82-ED71-45B2-9D02-DA9DA0363428 Q42536304-CF8FE7ED-3FF5-4685-A425-FE7B4F5059ED Q45943395-B0115B97-B06A-4C7C-AD9F-4CBE4E8E7E58 Q47558038-6AC07BE2-3CC4-48FF-9190-9075F91DD396 Q50053952-D7E03EDB-AE04-4297-89B1-75408C9987F9 Q52352531-0B41B54C-5FD3-49F1-9EB0-C343E4FEDA62 Q54942061-133C6DE5-C4D0-453A-947D-78A111840E5C Q55245667-3D193F47-71AF-4DC6-9074-9BBBCED15FB4 Q55364538-896EBF59-993C-4405-ADE0-EEC31059FD9A Q55510730-06F12B09-9585-48C1-9BCA-C5446FF0F207 Q57211963-299B7222-A5DF-4A30-AB53-C5FE9E6426BF

P2860

Microbial contamination in next generation sequencing: implications for sequence-based analysis of clinical samples.

http://www.wikidata.org/entity/Q34550120

description

2014 nî lūn-bûn

@nan

2014 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի նոյեմբերին հրատարակված գիտական հոդված

@hy

2014年の論文

@ja

2014年論文

@yue

2014年論文

@zh-hant

2014年論文

@zh-hk

2014年論文

@zh-mo

2014年論文

@zh-tw

2014年论文

@wuu

name

Microbial contamination in nex ...... analysis of clinical samples.

@ast

Microbial contamination in nex ...... analysis of clinical samples.

@en

Microbial contamination in nex ...... analysis of clinical samples.

@nl

type

label

Microbial contamination in nex ...... analysis of clinical samples.

@ast

Microbial contamination in nex ...... analysis of clinical samples.

@en

Microbial contamination in nex ...... analysis of clinical samples.

@nl

prefLabel

Microbial contamination in nex ...... analysis of clinical samples.

@ast

Microbial contamination in nex ...... analysis of clinical samples.

@en

Microbial contamination in nex ...... analysis of clinical samples.

@nl

P1433

Q34550120-949E9EEF-1516-4145-B7F8-0AA9E48F05A4

P1476

Q34550120-44D820C7-FD63-4C79-B5E4-30FBADF2C0FC

P2093

Q34550120-6CB17B3B-E661-4BA9-BB71-8DFA2BF9E496

Q34550120-7733FBD1-552A-4B91-BE84-01A488A51D6D

Q34550120-901593FB-4B57-4D6D-8BD2-1B1D72E1A74C

Q34550120-98D93526-4983-4DD2-AB34-F7DB73AC7A89

Q34550120-A1E3BCEA-2E12-4A84-BF18-15175145EDDB

Q34550120-B448E13D-41E2-4B17-BBB8-66E09CFDD7D7

Q34550120-D43684C4-9619-4AB7-AB6A-E488FAE6B6D4

Q34550120-E43017F5-BD2C-4965-AA30-82FAA78B1F01

P2860

Q34550120-0E0B0345-8BD4-47FB-9784-4BFF67072509

Q34550120-0E44A18D-FF7F-47FD-B5B1-9D47EEF1D1E0

Q34550120-13E8FC05-A6D2-4C86-B96A-1FA1AB4D6316

Q34550120-1E1C0AEC-510D-4ABC-9F7A-0CE9EABB99DB

Q34550120-1EA229CC-8B1D-4FE1-93C9-07E20D651CD3

Q34550120-2C4A7DC7-76DD-4D97-AE7A-E167ACE5C4AA

Q34550120-38B08EEB-5246-4A12-9A95-F87F87A05AA9

Q34550120-3A635B8A-5986-412E-99CF-658CBB303F13

Q34550120-3BD9AA7D-42D1-491A-8E00-8C89E9509FFE

Q34550120-3F1B8C69-4892-4705-916F-8EE4E7F36ADF

P304

Q34550120-0A01284E-51FA-405B-901A-7461AF8108FB

P31

Q34550120-344D57C7-70BF-49DF-9094-F6025E17D481

P356

Q34550120-B63CA4EF-E081-490D-B63F-146442440C56

P433

Q34550120-C246190F-AC55-4168-825D-2B3B32555BA0

P478

Q34550120-49E54760-3F53-47B1-B6D4-BB33A3FACBF4

P50

Q34550120-99BFA81A-8485-4BB2-9DF7-1DB74F70D864

Q34550120-FC122C2E-4796-48C0-842D-E62203686AB6

P577

Q34550120-86C7B606-22AE-4FE1-B161-D98F7B4C9858

P5875

Q34550120-9742B588-BA87-4581-9BE5-9C1AE9F6E853

P698

Q34550120-6FB2E518-3FD3-499F-8264-3F109B6AA0A5

P932

Q34550120-069586F0-C876-42F7-9BFA-F266DC5A37B7

P356

JOURNAL.PPAT.1004437

P1433

P1476

Microbial contamination in nex ...... analysis of clinical samples.

@en

P2093

Christopher M Taylor

http://www.w3.org/2001/XMLSchema#string

Claire Fewell

http://www.w3.org/2001/XMLSchema#string

Guorong Xu

http://www.w3.org/2001/XMLSchema#string

Lisa Morici

http://www.w3.org/2001/XMLSchema#string

Melody Baddoo

http://www.w3.org/2001/XMLSchema#string

Michael J Strong

http://www.w3.org/2001/XMLSchema#string

Sandra Splinter Bon-Durant

http://www.w3.org/2001/XMLSchema#string

Zhen Lin

http://www.w3.org/2001/XMLSchema#string

P2860

Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

Integrative analysis of environmental sequences using MEGAN4

Comprehensive molecular characterization of human colon and rectal cancer

Comprehensive molecular portraits of human breast tumours

Clonal integration of a polyomavirus in human Merkel cell carcinoma

Basic local alignment search tool

Comprehensive genomic characterization of squamous cell lung cancers.

Routine use of microbial whole genome sequencing in diagnostic and public health microbiology

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

P304

e1004437

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1371/JOURNAL.PPAT.1004437

http://www.w3.org/2001/XMLSchema#string

P433

11

http://www.w3.org/2001/XMLSchema#string

P478

10

http://www.w3.org/2001/XMLSchema#string

P50

Erik K Flemington

P577

2014-11-20T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

268632284

http://www.w3.org/2001/XMLSchema#string

P698

25412476

http://www.w3.org/2001/XMLSchema#string

P932

4239086

http://www.w3.org/2001/XMLSchema#string