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Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events

Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events

http://www.wikidata.org/entity/Q34555802

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Inferring horizontal gene transfer The transferome of metabolic genes explored: analysis of the horizontal transfer of enzyme encoding genes in unicellular eukaryotes The ancestor of the Paulinella chromatophore obtained a carboxysomal operon by horizontal gene transfer from a Nitrococcus-like gamma-proteobacterium The power of phylogenetic approaches to detect horizontally transferred genes Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes Pattern pluralism and the Tree of Life hypothesis On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales Genomes of Stigonematalean cyanobacteria (subsection V) and the evolution of oxygenic photosynthesis from prokaryotes to plastids Lateral transfer of genes and gene fragments in Staphylococcus extends beyond mobile elements Endosymbiotic associations within protists Function and evolution of channels and transporters in photosynthetic membranes The Primitive Thylakoid-Less Cyanobacterium Gloeobacter Is a Common Rock-Dwelling Organism Microenvironmental Ecology of the Chlorophyll b-Containing Symbiotic Cyanobacterium Prochloron in the Didemnid Ascidian Lissoclinum patella HGT turbulence: Confounding phylogenetic influence of duplicative horizontal transfer and differential gene conversion Evidence of a chimeric genome in the cyanobacterial ancestor of plastids The global landscape of sequence diversity Refuting phylogenetic relationships The mercury resistance operon: from an origin in a geothermal environment to an efficient detoxification machine Of woods and webs: possible alternatives to the tree of life for studying genomic fluidity in E. coli Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus.Extensive horizontal transfer of core genome genes between two Lactobacillus species found in the gastrointestinal tract Uncovering rate variation of lateral gene transfer during bacterial genome evolution.Chlamydial genes shed light on the evolution of photoautotrophic eukaryotes Evidence for positive selection acting on microcystin synthetase adenylation domains in three cyanobacterial genera Genome-wide survey of prokaryotic serine proteases: analysis of distribution and domain architectures of five serine protease families in prokaryotes Horizontal Gene Transfers in prokaryotes show differential preferences for metabolic and translational genes.Are protein domains modules of lateral genetic transfer?Origin of saxitoxin biosynthetic genes in cyanobacteria.GenGIS: A geospatial information system for genomic data.The evolutionary history of protein domains viewed by species phylogeny.Signature proteins for the major clades of Cyanobacteria MimiLook: A Phylogenetic Workflow for Detection of Gene Acquisition in Major Orthologous Groups of Megavirales Intertwined evolutionary histories of marine Synechococcus and Prochlorococcus marinus Lateral transfer of genes and gene fragments in prokaryotes Phylogenomic analysis of marine Roseobacters.The tree and net components of prokaryote evolution Blueprint for a minimal photoautotrophic cell: conserved and variable genes in Synechococcus elongatus PCC 7942.Inteins as indicators of gene flow in the halobacteria Complex evolutionary history of the Aeromonas veronii group revealed by host interaction and DNA sequence data Horizontal gene transfer from extinct and extant lineages: biological innovation and the coral of life.

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Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events

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2006 nî lūn-bûn

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2006 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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Phylogenetic analyses of cyano ...... orizontal gene transfer events

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Phylogenetic analyses of cyano ...... orizontal gene transfer events

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Phylogenetic analyses of cyano ...... orizontal gene transfer events

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Phylogenetic analyses of cyano ...... orizontal gene transfer events

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Phylogenetic analyses of cyano ...... orizontal gene transfer events

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Phylogenetic analyses of cyano ...... orizontal gene transfer events

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Phylogenetic analyses of cyano ...... orizontal gene transfer events

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R Thane Papke

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Robert L Charlebois

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W Ford Doolittle

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P2860

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

The cobweb of life revealed by genome-scale estimates of horizontal gene transfer

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

Accelerated evolution associated with genome reduction in a free-living prokaryote

Lateral Gene Transfer and the Origins of Prokaryotic Groups

The net of life: reconstructing the microbial phylogenetic network.

Lateral gene transfer and the nature of bacterial innovation

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Prochlorococcus, a marine photosynthetic prokaryote of global significance

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10.1101/GR.5322306

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9

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16

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horizontal gene transfer

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