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An integrated model of transcription factor diffusion shows the importance of intersegmental transfer and quaternary protein structure for target site finding.Method for the analysis of contribution of sliding and hopping to a facilitated diffusion of DNA-binding protein: Application to in vivo data.Direct observation of TALE protein dynamics reveals a two-state search mechanismVariance-corrected Michaelis-Menten equation predicts transient rates of single-enzyme reactions and response times in bacterial gene-regulation.Proteins searching for their target on DNA by one-dimensional diffusion: overcoming the "speed-stability" paradox.Quantitative influence of macromolecular crowding on gene regulation kinetics.Foundations for modeling the dynamics of gene regulatory networks: a multilevel-perspective review.Tethered particle analysis of supercoiled circular DNA using peptide nucleic acid handles.Physical constraints determine the logic of bacterial promoter architectures.Rad4 recognition-at-a-distance: Physical basis of conformation-specific anomalous diffusion of DNA repair proteins.What matters for lac repressor search in vivo--sliding, hopping, intersegment transfer, crowding on DNA or recognition?Real sequence effects on the search dynamics of transcription factors on DNA.Signal focusing through active transport.The effects of transcription factor competition on gene regulation.Intersegmental transfer of proteins between DNA regions in the presence of crowding.DNA Internal Motion Likely Accelerates Protein Target Search in a Packed Nucleoid.Diffusive escape through a narrow opening: new insights into a classic problem.Acceleration of bursty multiprotein target search kinetics on DNA by colocalisation.Non-Markovian effects in the first-passage dynamics of obstructed tracer particle diffusion in one-dimensional systems.Optimization and universality of Brownian search in a basic model of quenched heterogeneous media.Energetic funnel facilitates facilitated diffusion.One-Dimensional Search Dynamics of Tumor Suppressor p53 Regulated by a Disordered C-Terminal Domain.Distance matters: the impact of gene proximity in bacterial gene regulation.How nonspecifically DNA-binding proteins search for the target in crowded environments.Transition from distributional to ergodic behavior in an inhomogeneous diffusion process: Method revealing an unknown surface diffusivity.Intracellular facilitated diffusion: searchers, crowders, and blockers.Structures and functions in the crowded nucleus: new biophysical insightsGene Expression Is Not Random: Scaling, Long-Range Cross-Dependence, and Fractal Characteristics of Gene Regulatory Networks
P2860
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P2860
description
2013 nî lūn-bûn
@nan
2013 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
In vivo facilitated diffusion model.
@ast
In vivo facilitated diffusion model.
@en
In vivo facilitated diffusion model.
@nl
type
label
In vivo facilitated diffusion model.
@ast
In vivo facilitated diffusion model.
@en
In vivo facilitated diffusion model.
@nl
prefLabel
In vivo facilitated diffusion model.
@ast
In vivo facilitated diffusion model.
@en
In vivo facilitated diffusion model.
@nl
P2860
P1433
P1476
In vivo facilitated diffusion model.
@en
P2093
Maximilian Bauer
P2860
P304
P356
10.1371/JOURNAL.PONE.0053956
P407
P50
P577
2013-01-18T00:00:00Z