Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted.
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Normalization and centering of array-based heterologous genome hybridization based on divergent control probesMismatch and G-stack modulated probe signals on SNP microarrays.Specificity of DNA microarray hybridization: characterization, effectors and approaches for data correction.Ammonia-oxidizing bacterial community composition in estuarine and oceanic environments assessed using a functional gene microarray.Experimental optimization of probe length to increase the sequence specificity of high-density oligonucleotide microarrays.Impact of point-mutations on the hybridization affinity of surface-bound DNA/DNA and RNA/DNA oligonucleotide-duplexes: comparison of single base mismatches and base bulges.Position dependent mismatch discrimination on DNA microarrays - experiments and model.Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adultsIsotope array analysis of Rhodocyclales uncovers functional redundancy and versatility in an activated sludge.An efficient algorithm for the stochastic simulation of the hybridization of DNA to microarraysHybridization thermodynamics of NimbleGen microarrays.Broad spectrum microarray for fingerprint-based bacterial species identificationDetection of tmRNA molecules on microarrays at low temperatures using helper oligonucleotidesLarge scale analysis of positional effects of single-base mismatches on microarray gene expression dataNon-target sites with single nucleotide insertions or deletions are frequently found in 16S rRNA sequences and can lead to false positives in fluorescence in situ hybridization (FISH).Identifying Fishes through DNA Barcodes and Microarrays.Beyond Affymetrix arrays: expanding the set of known hybridization isotherms and observing pre-wash signal intensities.Detection of NASBA amplified bacterial tmRNA molecules on SLICSel designed microarray probesInvestigation of parameters that affect the success rate of microarray-based allele-specific hybridization assays.Modeling formamide denaturation of probe-target hybrids for improved microarray probe design in microbial diagnostics.Mathematical tools to optimize the design of oligonucleotide probes and primers.Structured oligonucleotides for target indexing to allow single-vessel PCR amplification and solid support microarray hybridizationInfluence of dangling ends and surface-proximal tails of targets on probe-target duplex formation in 16S rRNA gene-based diagnostic arrays.Revision of the nonequilibrium thermal dissociation and stringent washing approaches for identification of mixed nucleic acid targets by microarrays.Multivariate analysis of complex DNA sequence electropherograms for high-throughput quantitative analysis of mixed microbial populationsMolecular techniques for pathogen identification and fungus detection in the environment.Identification of non-specific hybridization using an empirical equation fitted to non-equilibrium dissociation curves.Thermostable DNA immobilization and temperature effects on surface hybridizationDiscriminating single-base difference miRNA expressions using microarray Probe Design Guru (ProDeG).In situ-synthesized virulence and marker gene biochip for detection of bacterial pathogens in water.Physico-chemical foundations underpinning microarray and next-generation sequencing experiments.A short-oligonucleotide microarray that allows improved detection of gastrointestinal tract microbial communities.Absolute quantification of microRNAs by using a universal reference.Detecting unknown sequences with DNA microarrays: explorative probe design strategies.An in vitro selection scheme for oligonucleotide probes to discriminate between closely related DNA sequences.Prediction of melting temperatures in fluorescence in situ hybridization (FISH) procedures using thermodynamic models.Transcriptome changes after genome-wide admixture in invasive sculpins (Cottus).Hamming Distance as a Concept in DNA Molecular Recognition.Was the Scanner Calibration Slide used for its intended purpose?Multi-stringency wash of partially hybridized 60-mer probes reveals that the stringency along the probe decreases with distance from the microarray surface.
P2860
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P2860
Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted.
description
2006 nî lūn-bûn
@nan
2006 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2006 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2006年の論文
@ja
2006年論文
@yue
2006年論文
@zh-hant
2006年論文
@zh-hk
2006年論文
@zh-mo
2006年論文
@zh-tw
2006年论文
@wuu
name
Tests of rRNA hybridization to ...... imination cannot be predicted.
@ast
Tests of rRNA hybridization to ...... imination cannot be predicted.
@en
Tests of rRNA hybridization to ...... imination cannot be predicted.
@nl
type
label
Tests of rRNA hybridization to ...... imination cannot be predicted.
@ast
Tests of rRNA hybridization to ...... imination cannot be predicted.
@en
Tests of rRNA hybridization to ...... imination cannot be predicted.
@nl
prefLabel
Tests of rRNA hybridization to ...... imination cannot be predicted.
@ast
Tests of rRNA hybridization to ...... imination cannot be predicted.
@en
Tests of rRNA hybridization to ...... imination cannot be predicted.
@nl
P2093
P2860
P356
P1476
Tests of rRNA hybridization to ...... imination cannot be predicted.
@en
P2093
Alex Pozhitkov
Arne W Nolte
Markus Beier
Peer Staehler
Rainer Sonnenberg
Tomislav Domazet-Loso
P2860
P356
10.1093/NAR/GKL133
P407
P577
2006-05-17T00:00:00Z