Prediction of CsrA-regulating small RNAs in bacteria and their experimental verification in Vibrio fischeri. - Wikidata - wikimedia - TriplyDB

Prediction of CsrA-regulating small RNAs in bacteria and their experimental verification in Vibrio fischeri.

Prediction of CsrA-regulating small RNAs in bacteria and their experimental verification in Vibrio fischeri.

http://www.wikidata.org/entity/Q34716327

about

Sibling rivalry: related bacterial small RNAs and their redundant and non-redundant roles Transcriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activity GacA-controlled activation of promoters for small RNA genes in Pseudomonas fluorescens Regulation of bacterial virulence by Csr (Rsm) systems RNA-binding proteins involved in post-transcriptional regulation in bacteria Prediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011 Bacterial small RNA regulators: versatile roles and rapidly evolving variations The GacS/GacA signal transduction system of Pseudomonas aeruginosa acts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs Structural basis for the CsrA-dependent modulation of translation initiation by an ancient regulatory protein.Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: focus on point miscalls and artefactual expansions Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array.Integrative FourD omics approach profiles the target network of the carbon storage regulatory system.Essential role for the response regulator PmrA in Coxiella burnetii type 4B secretion and colonization of mammalian host cells.A sequence-based approach for prediction of CsrA/RsmA targets in bacteria with experimental validation in Pseudomonas aeruginosa.Analysis of the BarA/UvrY two-component system in Shewanella oneidensis MR-1 Campylobacter jejuni CsrA complements an Escherichia coli csrA mutation for the regulation of biofilm formation, motility and cellular morphology but not glycogen accumulation Legionella pneumophila adaptation to intracellular life and the host response: clues from genomics and transcriptomics.Small Regulatory RNA and Legionella pneumophila.Spontaneous phenotypic suppression of GacA-defective Vibrio fischeri is achieved via mutation of csrA and ihfA.Transcriptional Profiling of Coxiella burnetii Reveals Extensive Cell Wall Remodeling in the Small Cell Variant Developmental Form.Virulence phenotypes of Legionella pneumophila associated with noncoding RNA lpr0035 Campylobacter jejuni CsrA mediates oxidative stress responses, biofilm formation, and host cell invasion.Transcriptome Sequencing Reveals Wide Expression Reprogramming of Basal and Unknown Genes in Leptospira biflexa Biofilms SigmaS controls multiple pathways associated with intracellular multiplication of Legionella pneumophila FliW antagonizes CsrA RNA binding by a noncompetitive allosteric mechanism.Chromatin Immunoprecipitation Sequencing Technology Reveals Global Regulatory Roles of Low-Cell-Density Quorum-Sensing Regulator AphA in the Pathogen Vibrio alginolyticus.In silico identification and experimental characterization of regulatory elements controlling the expression of the Salmonella csrB and csrC genes Mechanisms of post-transcriptional gene regulation in bacterial biofilms.Small RNAs as regulators of primary and secondary metabolism in Pseudomonas species.The Csr/Rsm system of Yersinia and related pathogens: a post-transcriptional strategy for managing virulence.Post-transcriptional regulation on a global scale: form and function of Csr/Rsm systems.The many forms of a pleomorphic bacterial pathogen-the developmental network of Legionella pneumophila.Prediction of bacterial small RNAs in the RsmA (CsrA) and ToxT pathways: a machine learning approach.RNA-based mechanisms of virulence control in Enterobacteriaceae Importance of Campylobacter jejuni FliS and FliW in Flagella Biogenesis and Flagellin Secretion.Feedback control of Campylobacter jejuni flagellin levels through reciprocal binding of FliW to flagellin and the global regulator CsrA.The Legionella pneumophila LetA/LetS two-component system exhibits rheostat-like behavior.Two small ncRNAs jointly govern virulence and transmission in Legionella pneumophila.A Csr-type regulatory system, including small non-coding RNAs, regulates the global virulence regulator RovA of Yersinia pseudotuberculosis through RovM.Construction of an rsmX co-variance model and identification of five rsmX non-coding RNAs in Pseudomonas syringae pv. tomato DC3000.

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Prediction of CsrA-regulating small RNAs in bacteria and their experimental verification in Vibrio fischeri.

http://www.wikidata.org/entity/Q34716327

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2006 nî lūn-bûn

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2006 թուականի Յուլիսին հրատարակուած գիտական յօդուած

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Prediction of CsrA-regulating ...... rification in Vibrio fischeri.

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Ann M Stevens

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Joshua W Williams

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Prajna R Kulkarni

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Rahul V Kulkarni

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Xiaohui Cui

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Mfold web server for nucleic acid folding and hybridization prediction

sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes.

Identification of CsrC and characterization of its role in epithelial cell invasion in Salmonella enterica serovar Typhimurium

Regulatory RNA as mediator in GacA/RsmA-dependent global control of exoproduct formation in Pseudomonas fluorescens CHA0

Three small RNAs jointly ensure secondary metabolism and biocontrol in Pseudomonas fluorescens CHA0

A regulatory RNA (PrrB RNA) modulates expression of secondary metabolite genes in Pseudomonas fluorescens F113

Identification of novel small RNAs using comparative genomics and microarrays

RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria

A survey of small RNA-encoding genes in Escherichia coli

Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors

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