RNA-Seq analysis of splicing in Plasmodium falciparum uncovers new splice junctions, alternative splicing and splicing of antisense transcripts
about
transformer-2 protein homolog beta, putativesmall nuclear ribonucleoprotein Sm D2, putativepre-mRNA-processing protein 45, putativepre-mRNA-processing factor 19, putativesplicing factor 3B subunit 1, putativeU4/U6.U5 tri-snRNP-associated protein 1, putativepre-mRNA-splicing factor CLF1, putativepre-mRNA-processing-splicing factor 8, putativeU4/U6 small nuclear ribonucleoprotein PRP31, putativeATP-dependent RNA helicase DDX23, putativeU6 snRNA-associated Sm-like protein LSm2, putativepre-mRNA-splicing factor BUD31, putativepre-mRNA-splicing factor SLU7, putativesplicing factor 3A subunit 2, putativepre-mRNA-splicing factor CWC15, putativeU1 small nuclear ribonucleoprotein C, putativeU4/U6.U5 small nuclear ribonucleoprotein, putativeU6 snRNA-associated Sm-like protein LSm3, putativesmall nuclear ribonucleoprotein G, putativeU5 small nuclear ribonucleoprotein 40 kDa protein, putativesmall nuclear ribonucleoprotein Sm D3, putativesplicing factor 3A subunit 3, putativeU5 small nuclear ribonucleoprotein component, putativepre-mRNA-splicing factor RDS3, putativepre-mRNA-splicing factor CEF1, putativeU6 snRNA-associated Sm-like protein LSm4, putativepre-mRNA-processing factor 6, putative13 kDa ribonucleoprotein-associated protein, putativesmall nuclear ribonucleoprotein Sm D1, putativeU6 snRNA-associated Sm-like protein LSm7, putativesplicing factor 3B subunit 3, putativepre-mRNA-splicing factor SYF1, putativeU4/U6 small nuclear ribonucleoprotein PRP3, putativeU4/U6.U5 tri-snRNP-associated protein 2, putativeU6 snRNA-associated Sm-like protein LSm6, putativeregulator of nonsense transcripts 3B, putativeU4/U6 small nuclear ribonucleoprotein PRP4, putativesmall nuclear ribonucleoprotein E, putativeintron-binding protein aquarius, putativesplicing factor 3B subunit 5, putative
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Translational regulation in blood stages of the malaria parasite Plasmodium spp.: systems-wide studies pave the wayInhibition of the SR protein-phosphorylating CLK kinases of Plasmodium falciparum impairs blood stage replication and malaria transmissionOrganization of Plasmodium falciparum spliceosomal core complex and role of arginine methylation in its assemblyA novel Plasmodium falciparum SR protein is an alternative splicing factor required for the parasites' proliferation in human erythrocytesPfSR1 controls alternative splicing and steady-state RNA levels in Plasmodium falciparum through preferential recognition of specific RNA motifsPrimerSeq: Design and visualization of RT-PCR primers for alternative splicing using RNA-seq data.Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparumThe role played by alternative splicing in antigenic variability in human endo-parasites.Genome-Wide Transcriptome Analysis Reveals Extensive Alternative Splicing Events in the Protoscoleces of Echinococcus granulosus and Echinococcus multilocularisPolysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparumNo more non-model species: the promise of next generation sequencing for comparative immunology.Transcript maturation in apicomplexan parasitesDirectional gene expression and antisense transcripts in sexual and asexual stages of Plasmodium falciparum.Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using Deep RNA sequencing.Strand-specific RNA-seq applied to malaria samples.Transcriptome analysis of the parasite Encephalitozoon cuniculi: an in-depth examination of pre-mRNA splicing in a reduced eukaryoteA simple model to explain evolutionary trends of eukaryotic gene architecture and expression: how competition between splicing and cleavage/polyadenylation factors may affect gene expression and splice-site recognition in eukaryotesAltered gamma-aminobutyric acid type B receptor subunit 1 splicing in alcoholics.Simultaneous transcriptional profiling of bacteria and their host cellsCircular RNA is expressed across the eukaryotic tree of life.Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages.Translational regulation during stage transitions in malaria parasitesStrand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA.Genomics and integrated systems biology in Plasmodium falciparum: a path to malaria control and eradication.A serine-arginine-rich (SR) splicing factor modulates alternative splicing of over a thousand genes in Toxoplasma gondii.A bioinformatic survey of RNA-binding proteins in PlasmodiumAnalysis of nucleosome positioning landscapes enables gene discovery in the human malaria parasite Plasmodium falciparum.UTR introns, antisense RNA and differentially spliced transcripts between Plasmodium yoelii subspecies.PFE0565w, a Plasmodium falciparum protein expressed in salivary gland sporozoitesDe novo assembly and transcriptome analysis of two contrary tillering mutants to learn the mechanisms of tillers outgrowth in switchgrass (Panicum virgatum L.).Single-target high-throughput transcription analyses reveal high levels of alternative splicing present in the FPPS/GGPPS from Plasmodium falciparum.New insights into the Plasmodium vivax transcriptome using RNA-Seq.Landscape and Dynamics of Transcription Initiation in the Malaria Parasite Plasmodium falciparumLariat sequencing in a unicellular yeast identifies regulated alternative splicing of exons that are evolutionarily conserved with humans.Preliminary analysis of Psoroptes ovis transcriptome in different developmental stages.Epigenetic regulation of Plasmodium falciparum clonally variant gene expression during development in Anopheles gambiae.Computational approaches to discovering noncoding RNA.Alternative splicing mechanisms orchestrating post-transcriptional gene expression: intron retention and the intron-rich genome of apicomplexan parasites.Characterization of P. vivax blood stage transcriptomes from field isolates reveals similarities among infections and complex gene isoforms.Branch point identification and sequence requirements for intron splicing in Plasmodium falciparum.
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P2860
RNA-Seq analysis of splicing in Plasmodium falciparum uncovers new splice junctions, alternative splicing and splicing of antisense transcripts
description
2011 nî lūn-bûn
@nan
2011 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@ast
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@en
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@nl
type
label
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@ast
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@en
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@nl
prefLabel
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@ast
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@en
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@nl
P2860
P921
P356
P1476
RNA-Seq analysis of splicing i ...... icing of antisense transcripts
@en
P2093
Joseph L DeRisi
Michelle T Dimon
P2860
P304
P356
10.1093/NAR/GKQ1223
P407
P577
2011-01-17T00:00:00Z