Computational identification of riboswitches based on RNA conserved functional sequences and conformations
about
Premature terminator analysis sheds light on a hidden world of bacterial transcriptional attenuationA new approach for detecting riboswitches in DNA sequencesUsing the fast fourier transform to accelerate the computational search for RNA conformational switchesMaximum expected accuracy structural neighbors of an RNA secondary structureMining Functional Elements in Messenger RNAs: Overview, Challenges, and PerspectivesFinding consensus stable local optimal structures for aligned RNA sequences and its application to discovering riboswitch elementsExpression of Shigella flexneri gluQ-rs gene is linked to dksA and controlled by a transcriptional terminator.Small RNAs in the genus ClostridiumSwiSpot: modeling riboswitches by spotting out switching sequences.An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs.Comparative genomics of metabolic capacities of regulons controlled by cis-regulatory RNA motifs in bacteria.Analysing RNA-kinetics based on folding space abstractionMolecular dissection of a Borrelia burgdorferi in vivo essential purine transport system.Vitamin B(12) synthesis and salvage pathways were acquired by horizontal gene transfer to the ThermotogalesUsing RNA inverse folding to identify IRES-like structural subdomains.Finding aptamers and small ribozymes in unexpected places.Application of supervised machine learning algorithms for the classification of regulatory RNA riboswitches.Riboswitch Scanner: an efficient pHMM-based web-server to detect riboswitches in genomic sequences.RNAPattMatch: a web server for RNA sequence/structure motif detection based on pattern matching with flexible gaps.Comparative genomics and phylogenomic analyses of lysine riboswitch distributions in bacteria.Characterization of a novel riboswitch-regulated lysine transporter in Aggregatibacter actinomycetemcomitans.Using RNA Sequence and Structure for the Prediction of Riboswitch Aptamer: A Comprehensive Review of Available Software and Tools.An archaeal, fluoride-responsive riboswitch provides an inducible expression system for hyperthermophiles.Phylogenomic and comparative analysis of the distribution and regulatory patterns of TPP riboswitches in fungi.Transcription and translation of the sigG gene is tuned for proper execution of the switch from early to late gene expression in the developing Bacillus subtilis spore.
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Computational identification of riboswitches based on RNA conserved functional sequences and conformations
description
2009 nî lūn-bûn
@nan
2009 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
Computational identification o ...... al sequences and conformations
@ast
Computational identification o ...... al sequences and conformations
@en
Computational identification o ...... al sequences and conformations
@nl
type
label
Computational identification o ...... al sequences and conformations
@ast
Computational identification o ...... al sequences and conformations
@en
Computational identification o ...... al sequences and conformations
@nl
prefLabel
Computational identification o ...... al sequences and conformations
@ast
Computational identification o ...... al sequences and conformations
@en
Computational identification o ...... al sequences and conformations
@nl
P2093
P2860
P356
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Computational identification o ...... al sequences and conformations
@en
P2093
Baw-Jhiune Liu
Chi-Ta Yeh
Hsien-Da Huang
Jorng-Tzong Horng
Li-Ching Wu
P2860
P304
P356
10.1261/RNA.1623809
P407
P577
2009-05-21T00:00:00Z