Incorporating motif analysis into gene co-expression networks reveals novel modular expression pattern and new signaling pathways.
about
Learning from Co-expression Networks: Possibilities and ChallengesTranscript level coordination of carbon pathways during silicon starvation-induced lipid accumulation in the diatom Thalassiosira pseudonanapENCODE: a plant encyclopedia of DNA elementsGenome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genesTranscriptome and metabolite profiling reveals that prolonged drought modulates the phenylpropanoid and terpenoid pathway in white grapes (Vitis vinifera L.).New BAR tools for mining expression data and exploring Cis-elements in Arabidopsis thaliana.An organ boundary-enriched gene regulatory network uncovers regulatory hierarchies underlying axillary meristem initiation.Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation.Neofusicoccum parvum Colonization of the Grapevine Woody Stem Triggers Asynchronous Host Responses at the Site of Infection and in the Leaves.Discovery of Novel Human Gene Regulatory Modules from Gene Co-expression and Promoter Motif Analysis.Salt stress and senescence: identification of cross-talk regulatory components.Discovery of core biotic stress responsive genes in Arabidopsis by weighted gene co-expression network analysisGlobal Gene-Expression Analysis to Identify Differentially Expressed Genes Critical for the Heat Stress Response in Brassica rapa.Combined physiological, transcriptome, and cis-regulatory element analyses indicate that key aspects of ripening, metabolism, and transcriptional program in grapes (Vitis vinifera L.) are differentially modulated accordingly to fruit sizeBjMYB1, a transcription factor implicated in plant defence through activating BjCHI1 chitinase expression by binding to a W-box-like element.Molecular mechanisms governing differential robustness of development and environmental responses in plants.Functional studies of transcription factors involved in plant defenses in the genomics era.Prediction of optimal gene functions for osteosarcoma using network-based- guilt by association method based on gene oncology and microarray profileConstruction and Optimization of a Large Gene Coexpression Network in Maize Using RNA-Seq Data.Spatial regulation of monolignol biosynthesis and laccase genes control developmental and stress-related lignin in flax.Genome-wide analysis of cis-regulatory element structure and discovery of motif-driven gene co-expression networks in grapevine.The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and mediate flavonol accumulation in response to the environmentA systems-oriented analysis of the grapevine R2R3-MYB transcription factor family uncovers new insights into the regulation of stilbene accumulation.Condition-dependent co-regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum.AtGGM2014, an Arabidopsis gene co-expression network for functional studies.Identifying key genes in glaucoma based on a benchmarked dataset and the gene regulatory network.An efficient transient expression system for gene function analysis in rose.Co-expression network analysis and cis-regulatory element enrichment determine putative functions and regulatory mechanisms of grapevine ATL E3 ubiquitin ligases.NetMiner-an ensemble pipeline for building genome-wide and high-quality gene co-expression network using massive-scale RNA-seq samples.Structural, Functional, and Evolutionary Characterization of Major Drought Transcription Factors Families in Maize.Structure and transcriptional regulation of the major intrinsic protein gene family in grapevine.
P2860
Q27015436-76ABA5BC-9C45-4616-8067-D108E67A9D02Q28597343-3F08A704-7904-49B1-9267-2586ACB88CCBQ28635111-D52F5A6D-E8FD-4F00-9E95-A3E68D90821DQ30360632-922C4347-7DDD-4C90-A2B5-857D7219E996Q31061477-71285DDB-CC56-4ADA-80AE-D93CDD7D7AEDQ31113924-35473C38-D0CD-4ED7-81BA-2ABD5DE9957BQ33359349-7A842CE2-0A4B-4B1B-9EBB-89E87E7B082EQ33363898-849F95AD-86E8-46BF-8A64-866556189807Q33844280-2D89481F-CA2D-477C-83C5-D142A076FA90Q33912209-46FBE23F-D002-4ED3-A9D8-EDFF6E1B04EAQ33931718-27BBBC28-AF56-467A-8E11-AA12612A1A05Q35570011-E560959C-FAD2-4496-B865-77570E13C9F9Q35671919-AACDFF39-DBF0-4E06-BFD7-F9F262AB5274Q36035235-B6C8C4B2-A16C-4C5F-B4E5-3B252B0090A2Q36063544-9006586B-DBC1-40D1-A1AA-50C608ED918EQ36837925-FC9350B0-6BDA-4D4E-AE0C-B3983D293151Q38404051-271BA594-122B-4D1C-B20C-E8E46F5A4B20Q38434316-E2657EA9-4876-48A9-AD57-385BD0B3319EQ38646016-8D6CE74E-FA67-4BF2-8B9A-EF796C493B1EQ38658038-0AE53FCD-7308-44B2-B569-8744E946FE7EQ38766263-F521C03C-024A-4FF8-B1E6-7881C7B28C00Q39471473-4365B81D-B08B-4575-9838-33B882D57BB7Q39608192-700AD127-F0A4-45C5-87D2-CCADCEBCE86AQ40546996-CCC7E51D-A2EB-476A-98A9-93B26C84648DQ41435409-949EC48D-74A0-4088-A5AE-6D3B16BDBE2AQ42659062-19D17927-B958-45DE-89BC-D847F5D394ACQ47122323-ABE15CE9-B59D-4B25-A5D3-9A49D067B2F8Q49913144-20BE534E-9DE6-4D58-9F30-4CBCFB14CB2CQ50099223-2ACD1035-61B5-4E73-88D2-5B71D06607D0Q54979583-17E2BCA0-D2B0-431F-9B37-29A9A98DE599Q55258302-878AF075-EE0B-4826-82CB-DE7DC9FE2A08
P2860
Incorporating motif analysis into gene co-expression networks reveals novel modular expression pattern and new signaling pathways.
description
2013 nî lūn-bûn
@nan
2013 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
Incorporating motif analysis i ...... rn and new signaling pathways.
@ast
Incorporating motif analysis i ...... rn and new signaling pathways.
@en
type
label
Incorporating motif analysis i ...... rn and new signaling pathways.
@ast
Incorporating motif analysis i ...... rn and new signaling pathways.
@en
prefLabel
Incorporating motif analysis i ...... rn and new signaling pathways.
@ast
Incorporating motif analysis i ...... rn and new signaling pathways.
@en
P2093
P2860
P1433
P1476
Incorporating motif analysis i ...... rn and new signaling pathways.
@en
P2093
Hans J Bohnert
Michael Snyder
Savithramma P Dinesh-Kumar
P2860
P304
P356
10.1371/JOURNAL.PGEN.1003840
P50
P577
2013-10-03T00:00:00Z