mrsFAST: a cache-oblivious algorithm for short-read mapping.
about
Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domesticationComputational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectivesAncient human genomes suggest three ancestral populations for present-day EuropeansGenomic legacy of the African cheetah, Acinonyx jubatusUsing ERDS to infer copy-number variants in high-coverage genomesFrom RNA-seq reads to differential expression resultsThe haplotype-resolved genome and epigenome of the aneuploid HeLa cancer cell lineMetagenomics: Retrospect and Prospects in High Throughput AgeComputational and bioinformatics frameworks for next-generation whole exome and genome sequencingDetection of Genomic Structural Variants from Next-Generation Sequencing DataSporadic autism exomes reveal a highly interconnected protein network of de novo mutationsExome sequencing in sporadic autism spectrum disorders identifies severe de novo mutationsPrimate evolution of the recombination regulator PRDM9Copy number variation detection and genotyping from exome sequence data.Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs.Tools for mapping high-throughput sequencing data.Clinical analysis and interpretation of cancer genome dataComputational solutions for omics data.Unraveling genomic variation from next generation sequencing data.The perfect neuroimaging-genetics-computation storm: collision of petabytes of data, millions of hardware devices and thousands of software toolsEvaluation and comparison of multiple aligners for next-generation sequencing data analysis.The CNVrd2 package: measurement of copy number at complex loci using high-throughput sequencing data.Optimization of miRNA-seq data preprocessing.Leveraging the power of high performance computing for next generation sequencing data analysis: tricks and twists from a high throughput exome workflowCypiripi: exact genotyping of CYP2D6 using high-throughput sequencing data.Determining multiallelic complex copy number and sequence variation from high coverage exome sequencing dataSpaced Seed Data Structures for De Novo Assembly.From next-generation resequencing reads to a high-quality variant data set.Improving read mapping using additional prefix gramsMOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping.Short Read Mapping: An Algorithmic Tour.Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massively parallel DNA sequencing.mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications.Allele-specific expression and eQTL analysis in mouse adipose tissue.Querying large read collections in main memory: a versatile data structure.Global copy number analyses by next generation sequencing provide insight into pig genome variation.Sequencing studies in human genetics: design and interpretation.Fast and sensitive alignment of microbial whole genome sequencing reads to large sequence datasets on a desktop PC: application to metagenomic datasets and pathogen identification.Whole-genome sequencing of individuals from a founder population identifies candidate genes for asthmaAssembly of non-unique insertion content using next-generation sequencing.
P2860
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P2860
mrsFAST: a cache-oblivious algorithm for short-read mapping.
description
2010 nî lūn-bûn
@nan
2010 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
mrsFAST: a cache-oblivious algorithm for short-read mapping.
@en
type
label
mrsFAST: a cache-oblivious algorithm for short-read mapping.
@en
prefLabel
mrsFAST: a cache-oblivious algorithm for short-read mapping.
@en
P2093
P2860
P356
P1433
P1476
mrsFAST: a cache-oblivious algorithm for short-read mapping
@en
P2093
Evan E Eichler
Faraz Hach
Farhad Hormozdiari
Fereydoun Hormozdiari
S Cenk Sahinalp
P2860
P2888
P304
P356
10.1038/NMETH0810-576
P577
2010-08-01T00:00:00Z