Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli. - Wikidata - wikimedia - TriplyDB

Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli.

Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli.

http://www.wikidata.org/entity/Q35073789

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In Silico Constraint-Based Strain Optimization Methods: the Quest for Optimal Cell Factories Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0 What is flux balance analysis?Computational design of auxotrophy-dependent microbial biosensors for combinatorial metabolic engineering experiments Identification of functional differences in metabolic networks using comparative genomics and constraint-based models MultiMetEval: comparative and multi-objective analysis of genome-scale metabolic models Enumeration of smallest intervention strategies in genome-scale metabolic networks k-OptForce: integrating kinetics with flux balance analysis for strain design CONSTRICTOR: constraint modification provides insight into design of biochemical networks Proteomic and metabolomic analyses reveal metabolic responses to 3-hydroxypropionic acid synthesized internally in cyanobacterium Synechocystis sp. PCC 6803 Rationales and approaches for studying metabolism in eukaryotic microalgae Toward systems metabolic engineering in cyanobacteria: opportunities and bottlenecks Functional integration of a metabolic network model and expression data without arbitrary thresholding.Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models Computationally efficient flux variability analysis.Synthetic and systems biology for microbial production of commodity chemicals.Engineering glucose metabolism of Escherichia coli under nitrogen starvation.JMassBalance: mass-balanced randomization and analysis of metabolic networks.Large-scale bi-level strain design approaches and mixed-integer programming solution techniques.Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling.Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods Dynamic strain scanning optimization: an efficient strain design strategy for balanced yield, titer, and productivity. DySScO strategy for strain design.Design of optimally constructed metabolic networks of minimal functionality.Microbial laboratory evolution in the era of genome-scale science.RobOKoD: microbial strain design for (over)production of target compounds.Cyanobacteria as photosynthetic biocatalysts: a systems biology perspective.PSAMM: A Portable System for the Analysis of Metabolic Models.The biomass objective function.Bridging the gap between fluxomics and industrial biotechnology.Systems biology of lactic acid bacteria: a critical review.Multi-scale modeling for sustainable chemical production.Adaptive laboratory evolution -- principles and applications for biotechnology.Application of theoretical methods to increase succinate production in engineered strains.Genome-scale metabolic models as platforms for strain design and biological discovery.In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals.In silico design of anaerobic growth-coupled product formation in Escherichia coli: experimental validation using a simple polyol, glycerol.In silico and in vivo stability analysis of a heterologous biosynthetic pathway for 1,4-butanediol production in metabolically engineered E. coli.Experimental evolution of a facultative thermophile from a mesophilic ancestor.A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011.Growth-coupled overproduction is feasible for almost all metabolites in five major production organisms.

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P2860

Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli.

http://www.wikidata.org/entity/Q35073789

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2009 nî lūn-bûn

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2009 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

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2009 թվականի հոտեմբերին հրատարակված գիտական հոդված

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2009年の論文

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Metabolic Engineering

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Model-driven evaluation of the ...... products of Escherichia coli.

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Adam M Feist

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Daniel C Zielinski

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Jeffrey D Orth

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P2860

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Description and interpretation of adaptive evolution of Escherichia coli K-12 MG1655 by using a genome-scale in silico metabolic model

Global reconstruction of the human metabolic network based on genomic and bibliomic data

Evolutionary programming as a platform for in silico metabolic engineering

Minimal Escherichia coli cell for the most efficient production of ethanol from hexoses and pentoses

Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox

Optknock: a bilevel programming framework for identifying gene knockout strategies for microbial strain optimization

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