Identification, characterization and molecular phylogeny of U12-dependent introns in the Arabidopsis thaliana genome.
about
Evolutionary conservation of minor U12-type spliceosome between plants and humansU12DB: a database of orthologous U12-type spliceosomal intronsIdentification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in DrosophilaAn early evolutionary origin for the minor spliceosomeThe significant other: splicing by the minor spliceosomeComprehensive analysis of alternative splicing in rice and comparative analyses with ArabidopsisU12 intron positions are more strongly conserved between animals and plants than U2 intron positions.The minor spliceosomal protein U11/U12-31K is an RNA chaperone crucial for U12 intron splicing and the development of dicot and monocot plants.U12 type introns were lost at multiple occasions during evolution.Evolutionary dynamics of U12-type spliceosomal introns.Comparison of splice sites in mammals and chicken.Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis.Bicistronic and fused monocistronic transcripts are derived from adjacent loci in the Arabidopsis genomeA mutational analysis of U12-dependent splice site dinucleotides.Complex spliceosomal organization ancestral to extant eukaryotes.Comparative analysis of information contents relevant to recognition of introns in many speciesPlantGDB, plant genome database and analysis tools.Comprehensive splice-site analysis using comparative genomics.The abundance of the spliceosomal snRNPs is not limiting the splicing of U12-type introns.xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome featuresRegulation of gene expression through inefficient splicing of U12-type intronsThe Arabidopsis homolog of human minor spliceosomal protein U11-48K plays a crucial role in U12 intron splicing and plant developmentUsing profiles based on nucleotide hydrophobicity to define essential regions for splicing.Structural features important for the U12 snRNA binding and minor spliceosome assembly of Arabidopsis U11/U12-small nuclear ribonucleoproteins.Complexity of the alternative splicing landscape in plants.Proximity of the U12 snRNA with both the 5' splice site and the branch point during early stages of spliceosome assemblyIdentification of a human ABCC10 orthologue in Catharanthus roseus reveals a U12-type intron determinant for the N-terminal domain feature.ERISdb: a database of plant splice sites and splicing signals.The Arabidopsis U12-type spliceosomal protein U11/U12-31K is involved in U12 intron splicing via RNA chaperone activity and affects plant development.Systematic genome-wide annotation of spliceosomal proteins reveals differential gene family expansion.Determinants of plant U12-dependent intron splicing efficiency.Characterization of conserved circular RNA in polyploid Gossypium species and their ancestors.Full-length sequence assembly reveals circular RNAs with diverse non-GT/AG splicing signals in rice.Consideration of non-canonical splice sites improves gene prediction on the Arabidopsis thaliana Niederzenz-1 genome sequence.quatre-quart1 is an indispensable U12 intron-containing gene that plays a crucial role in Arabidopsis development.The Arabidopsis U11/U12-65K is an indispensible component of minor spliceosome and plays a crucial role in U12 intron splicing and plant development.
P2860
Q24537438-8389AAE6-D392-49A4-8755-F45A0821E19FQ24674116-52D996D4-ABCF-4AB0-8AFC-4A87E68CC0B0Q28268106-EE4281A3-F891-427A-949E-836C79FB2FABQ28269363-454BCE56-51AC-420C-B897-238F39430189Q28277280-42E80977-C7C2-4E06-8F7D-EA8064A3CE75Q30358980-D68DAD60-D3C5-424F-B8EB-A2D9920ED2C9Q33334678-B42A3282-65B7-49DE-A359-3574EDD33186Q33354166-E9A0C003-1AD4-4C35-B19F-A49D434C5D7BQ33530710-931B0AB0-AB6E-4819-9C33-347D781E295EQ33531915-E46BD4A2-AA52-4464-BDC8-4B8BB5144EA9Q33596217-E73F0B32-5CD6-4DC9-BF3B-9DB7DD57CBAFQ34185155-1C8FAEFC-A5B7-485C-BB90-AAC07E5E3C09Q34366200-07958037-A682-4B9E-952E-5DC27D7749A2Q34366576-60FA709C-904B-4988-A3B3-04305309442DQ34385944-7AF49795-2645-44CD-96B6-067962F5E827Q34550339-2FD9552C-6DB6-4C27-852B-148220E5B5C6Q34927332-C4F62B3D-770E-44D7-ABD9-1B6A03F0A8A2Q35013128-A6F931A9-0A0B-4062-B96F-FB770D56C085Q35057511-7CE81375-3A45-44B6-A009-A20D5E60E2AEQ35630321-8FD3D382-3BF3-4B99-81B4-D84B9AC119B9Q36191883-5F36EDE1-3FE5-45E3-87D8-285C13EA9BCFQ36967640-10AC0B0C-44BB-4A32-9B5B-B09574AADAABQ37003972-EFFBFEC8-7A24-4E02-A3F4-3F96287E981EQ37130435-73D829B2-8BBC-46E4-8DE5-048D9214291DQ38157823-2358FBAD-EBFC-4724-983C-946E2477C955Q42141598-FC0ED45B-ACFF-4B6E-9669-876B350A7342Q42661149-4FBC63AB-D7F5-486B-A26D-F7EB9A4125E9Q42773554-700E60FF-FC46-473F-9815-AFABA02D516CQ42781177-0ED30010-0908-44D7-8F41-C2203FD99987Q43192298-608CAB7E-5586-47CC-9BF0-38D62EB2D11DQ44853494-EDCBCD8B-B8DC-47B0-B24D-E7137D7CF97FQ46296495-FD9BFF75-5FAD-4D75-B31B-1FA27A852FF2Q46478123-361318D1-F864-47BB-AC89-C049398DE428Q47129640-B2482FBF-620A-4FD1-99D6-680501A3029FQ50439373-DF515811-EC7B-4BAB-AD84-61FC576BFE47Q51749830-2A0B6971-92F5-4DFA-B1A1-9B7FE8D2E25F
P2860
Identification, characterization and molecular phylogeny of U12-dependent introns in the Arabidopsis thaliana genome.
description
2003 nî lūn-bûn
@nan
2003 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
Identification, characterizati ...... e Arabidopsis thaliana genome.
@ast
Identification, characterizati ...... e Arabidopsis thaliana genome.
@en
type
label
Identification, characterizati ...... e Arabidopsis thaliana genome.
@ast
Identification, characterizati ...... e Arabidopsis thaliana genome.
@en
prefLabel
Identification, characterizati ...... e Arabidopsis thaliana genome.
@ast
Identification, characterizati ...... e Arabidopsis thaliana genome.
@en
P2860
P356
P1476
Identification, characterizati ...... e Arabidopsis thaliana genome.
@en
P2093
Volker Brendel
P2860
P304
P356
10.1093/NAR/GKG492
P407
P577
2003-08-01T00:00:00Z