Capturing the cloud of diversity reveals complexity and heterogeneity of MRSA carriage, infection and transmission. - Wikidata - wikimedia - TriplyDB

Capturing the cloud of diversity reveals complexity and heterogeneity of MRSA carriage, infection and transmission.

Capturing the cloud of diversity reveals complexity and heterogeneity of MRSA carriage, infection and transmission.

http://www.wikidata.org/entity/Q35311983

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Impact of Bacterial and Human Genetic Variation on Staphylococcus aureus Infections The prevalence of antibiotic-resistant Staphylococcus aureus nasal carriage among industrial hog operation workers, community residents, and children living in their households: North Carolina, USA Within-host evolution of bacterial pathogens.Epidemic potential of Escherichia coli ST131 and Klebsiella pneumoniae ST258: a systematic review and meta-analysis Livestock-Associated, Antibiotic-Resistant Staphylococcus aureus Nasal Carriage and Recent Skin and Soft Tissue Infection among Industrial Hog Operation Workers The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data.Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation.Genomic diversity in autopsy samples reveals within-host dissemination of HIV-associated Mycobacterium tuberculosis.A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota.A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions.Genomic Analysis of Companion Rabbit Staphylococcus aureus.Whole-Genome Comparison Uncovers Genomic Mutations between Group B Streptococci Sampled from Infected Newborns and Their Mothers.Nonmedical Uses of Antibiotics: Time to Restrict Their Use?Molecular epidemiological analysis to assess the influence of pet-ownership in the biodiversity of Staphylococcus aureus and MRSA in dog- and non-dog-owning healthy households.Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus.Utility of Whole-Genome Sequencing in Characterizing Acinetobacter Epidemiology and Analyzing Hospital Outbreaks Next-Generation Sequencing Confirms Presumed Nosocomial Transmission of Livestock-Associated Methicillin-Resistant Staphylococcus aureus in the Netherlands Microbial bioinformatics 2020.Transmission of methicillin-resistant Staphylococcus aureus in long-term care facilities and their related healthcare networks.Report of mecC-carrying MRSA in domestic swine.Omics Approaches for the Study of Adaptive Immunity to Staphylococcus aureus and the Selection of Vaccine Candidates.Large scale genomic analysis shows no evidence for pathogen adaptation between the blood and cerebrospinal fluid niches during bacterial meningitis.Molecular Approaches to Understanding Transmission and Source Attribution in Nontyphoidal Salmonella and Their Application in Africa.Relevant units of analysis for applied and basic research dealing with neglected transmissible diseases: The predominant clonal evolution model of pathogenic microorganisms Bacterial resistance to antimicrobial agents and its impact on veterinary and human medicine.Longitudinal genomic surveillance of multidrug-resistant Escherichia coli carriage in a long-term care facility in the United Kingdom.Emergence and Spread of Antimicrobial Resistance: Recent Insights from Bacterial Population Genomics.Genomic Infectious Disease Epidemiology in Partially Sampled and Ongoing Outbreaks.Recommendations for approaches to meticillin-resistant staphylococcal infections of small animals: diagnosis, therapeutic considerations and preventative measures.: Clinical Consensus Guidelines of the World Association for Veterinary Dermatology.Use of bacterial whole-genome sequencing to understand and improve the management of invasive Staphylococcus aureus infections.Intrahost Evolution of Methicillin-Resistant Staphylococcus aureus USA300 Among Individuals With Reoccurring Skin and Soft-Tissue Infections.The effect of genetic structure on molecular dating and tests for temporal signal.Staphylococcus aureus colonization in atopic eczema and its association with filaggrin gene mutations.Epidemiological characterization of a nosocomial outbreak of extended spectrum β-lactamase Escherichia coli ST-131 confirms the clinical value of core genome multilocus sequence typing.Shared Genomic Variants: Identification of Transmission Routes Using Pathogen Deep-Sequence Data.The Microevolution and Epidemiology of Staphylococcus aureus Colonization during Atopic Eczema Disease Flare.Longitudinal genomic surveillance of MRSA in the UK reveals transmission patterns in hospitals and the community.Pathogen hide-and-'seq'.Genomic epidemiology of multidrug-resistant Gram-negative organisms.Genomic differences between nasal Staphylococcus aureus from hog slaughterhouse workers and their communities.

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Capturing the cloud of diversity reveals complexity and heterogeneity of MRSA carriage, infection and transmission.

http://www.wikidata.org/entity/Q35311983

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2015 nî lūn-bûn

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Nature Communications

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Duncan J Maskell

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Fiona J E Morgan

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Sharon J Peacock

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Culture-independent detection and characterisation of Mycobacterium tuberculosis and M. africanum in sputum samples using shotgun metagenomics on a benchtop sequencer

Bayesian phylogenetics with BEAUti and the BEAST 1.7

A large genome center's improvements to the Illumina sequencing system.

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

MRBAYES: Bayesian inference of phylogenetic trees

On the number of segregating sites in genetical models without recombination

Routine use of microbial whole genome sequencing in diagnostic and public health microbiology

Multiple colonization with S. pneumoniae before and after introduction of the seven-valent conjugated pneumococcal polysaccharide vaccine

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

Autoinduction and signal transduction in the regulation of staphylococcal virulence

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10.1038/NCOMMS7560

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Julian Parkhill

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