CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
about
A fungal phylogeny based on 82 complete genomes using the composition vector methodAn opportunistic pathogen isolated from the gut of an obese human causes obesity in germfree miceCVTree update: a newly designed phylogenetic study platform using composition vectors and whole genomesNew developments of alignment-free sequence comparison: measures, statistics and next-generation sequencingAlignment-free phylogenetics and population geneticsLVTree Viewer: An Interactive Display for the All-Species Living Tree Incorporating Automatic Comparison with Prokaryotic SystematicsAnalysis and comparison of the pan-genomic properties of sixteen well-characterized bacterial genera.Comparison of next-generation sequencing samples using compression-based distances and its application to phylogenetic reconstruction.Prokaryotic phylogenies inferred from whole-genome sequence and annotation dataRapid DNA barcoding analysis of large datasets using the composition vector method.Bioinformatics in China: a personal perspectiveEvaluation of genomic island predictors using a comparative genomics approachRole of translational coupling in robustness of bacterial chemotaxis pathway.CEG: a database of essential gene clusters.Draft genome sequence of the marine sediment-derived actinomycete Streptomyces xinghaiensis NRRL B24674T.Analyzing multi-locus plant barcoding datasets with a composition vector method based on adjustable weighted distanceKmacs: the k-mismatch average common substring approach to alignment-free sequence comparison.A coverage criterion for spaced seeds and its applications to support vector machine string kernels and k-mer distancesIdentifying pathogenicity islands in bacterial pathogenomics using computational approachesNew powerful statistics for alignment-free sequence comparison under a pattern transfer model.Shigella strains are not clones of Escherichia coli but sister species in the genus EscherichiaAssembly-free genome comparison based on next-generation sequencing reads and variable length patterns.Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis.An assembly and alignment-free method of phylogeny reconstruction from next-generation sequencing dataSpecific Gene Loci of Clinical Pseudomonas putida Isolates.Phylogeny Reconstruction with Alignment-Free Method That Corrects for Horizontal Gene Transfer.The genome and transcriptome of Trichormus sp. NMC-1: insights into adaptation to extreme environments on the Qinghai-Tibet PlateauKGCAK: a K-mer based database for genome-wide phylogeny and complexity evaluation.Diversity, evolution and expression profiles of histone acetyltransferases and deacetylases in oomycetes.Prediction of virus-host infectious association by supervised learning methods.CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy.Jackknife and bootstrap tests of the composition vector trees.Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences.A genome Tree of Life for the Fungi kingdom.CloudPhylo: a fast and scalable tool for phylogeny reconstruction.Clustering of reads with alignment-free measures and quality values.Xanthomonas adaptation to common bean is associated with horizontal transfers of genes encoding TAL effectors.Proper distance metrics for phylogenetic analysis using complete genomes without sequence alignment.First draft genome sequence of Aureimonas altamirensis, isolated from patient blood culture.Estimating evolutionary distances between genomic sequences from spaced-word matches.
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P2860
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
description
2004 nî lūn-bûn
@nan
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
2004年论文
@zh
2004年论文
@zh-cn
name
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
@ast
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
@en
type
label
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
@ast
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
@en
prefLabel
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
@ast
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
@en
P2093
P2860
P356
P1476
CVTree: a phylogenetic tree reconstruction tool based on whole genomes.
@en
P2093
P2860
P356
10.1093/NAR/GKH362
P407
P433
Web Server issue
P577
2004-07-01T00:00:00Z