In vivo and transcriptome-wide identification of RNA binding protein target sites.
about
Seq and CLIP through the miRNA worldThe "Observer Effect" in genome-wide surveys of protein-RNA interactionsHigh-throughput characterization of protein-RNA interactionsAutophagy and modular restructuring of metabolism control germline tumor differentiation and proliferation in C. elegansGenome-wide analysis of GLD-1-mediated mRNA regulation suggests a role in mRNA storageStructural Analysis of the Quaking Homodimerization InterfaceStructure-function studies of STAR family Quaking proteins bound to their in vivo RNA target sitesAnnotating RNA motifs in sequences and alignmentsCapR: revealing structural specificities of RNA-binding protein target recognition using CLIP-seq dataRNA-binding protein GLD-1/quaking genetically interacts with the mir-35 and the let-7 miRNA pathways in Caenorhabditis elegans.Computational solutions for omics data.Post-transcriptional RNA regulons affecting cell cycle and proliferation.A new dataset of spermatogenic vs. oogenic transcriptomes in the nematode Caenorhabditis elegans.RIP-chip-SRM--a new combinatorial large-scale approach identifies a set of translationally regulated bantam/miR-58 targets in C. elegans.Unambiguous identification of miRNA:target site interactions by different types of ligation reactions.Rbfox3 controls the biogenesis of a subset of microRNAs.The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms.Paternal RNA contributions in the Caenorhabditis elegans zygote.Competence for chemical reprogramming of sexual fate correlates with an intersexual molecular signature in Caenorhabditis elegans.Two classes of gap junction channels mediate soma-germline interactions essential for germline proliferation and gametogenesis in Caenorhabditis elegansA computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencingSystematic transcriptome wide analysis of lncRNA-miRNA interactions.Translational control of the oogenic program by components of OMA ribonucleoprotein particles in Caenorhabditis elegansEncapsidation of host-derived factors correlates with enhanced infectivity of Sindbis virusExtraction and separation of proteins by ionic liquid aqueous two-phase system.Evolutionary Dynamics of GLD-1-mRNA complexes in Caenorhabditis nematodes.RNA structure generates natural cooperativity between single-stranded RNA binding proteins targeting 5' and 3'UTRs.Probing RNA-protein networks: biochemistry meets genomicsGenome-wide mapping of cellular protein-RNA interactions enabled by chemical crosslinking.How Many Genes Are Expressed in a Transcriptome? Estimation and Results for RNA-Seq.Design and bioinformatics analysis of genome-wide CLIP experiments.Transdifferentiation mediated tumor suppression by the endoplasmic reticulum stress sensor IRE-1 in C. elegansmiTALOS v2: Analyzing Tissue Specific microRNA FunctionGene expression of pluripotency determinants is conserved between mammalian and planarian stem cells.Translational activation maintains germline tissue homeostasis during adulthood.SimiRa: A tool to identify coregulation between microRNAs and RNA-binding proteins.DO-RIP-seq to quantify RNA binding sites transcriptome-wide.Modifiers of solid RNP granules control normal RNP dynamics and mRNA activity in early developmentGenome-wide approaches to dissect the roles of RNA binding proteins in translational control: implications for neurological diseasesGenomic Analyses of Sperm Fate Regulator Targets Reveal a Common Set of Oogenic mRNAs in Caenorhabditis elegans
P2860
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P2860
In vivo and transcriptome-wide identification of RNA binding protein target sites.
description
2011 nî lūn-bûn
@nan
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
2011年论文
@zh
2011年论文
@zh-cn
name
In vivo and transcriptome-wide identification of RNA binding protein target sites.
@ast
In vivo and transcriptome-wide identification of RNA binding protein target sites.
@en
type
label
In vivo and transcriptome-wide identification of RNA binding protein target sites.
@ast
In vivo and transcriptome-wide identification of RNA binding protein target sites.
@en
prefLabel
In vivo and transcriptome-wide identification of RNA binding protein target sites.
@ast
In vivo and transcriptome-wide identification of RNA binding protein target sites.
@en
P2093
P2860
P50
P1433
P1476
In vivo and transcriptome-wide identification of RNA binding protein target sites.
@en
P2093
Anna-Carina Jungkamp
Desirea Mecenas
Dominic Grün
Guido Mastrobuoni
Marlon Stoeckius
Stefan Kempa
P2860
P304
P356
10.1016/J.MOLCEL.2011.11.009
P577
2011-12-01T00:00:00Z