Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
about
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot projectEGASP: the human ENCODE Genome Annotation Assessment ProjectA code for transcription initiation in mammalian genomesIdentification of plant promoter constituents by analysis of local distribution of short sequencesThe human genomic melting map.MetaProm: a neural network based meta-predictor for alternative human promoter prediction.Accurate splice site prediction using support vector machinesIdentifying regulatory elements in eukaryotic genomes.Polymorphism in the flanking regions of the PbGP43 gene from the human pathogen Paracoccidioides brasiliensis: search for protein binding sequences and poly(A) cleavage sites.High sensitivity TSS prediction: estimates of locations where TSS cannot occur.Ensemble approach combining multiple methods improves human transcription start site predictionIdentification of a secondary promoter of CASP8 and its related transcription factor PURαA composite method based on formal grammar and DNA structural features in detecting human polymerase II promoter region.Effective automated feature construction and selection for classification of biological sequences.Mesoscopic model and free energy landscape for protein-DNA binding sites: analysis of cyanobacterial promoters.SeqTools: visual tools for manual analysis of sequence alignments.Recognition of prokaryotic and eukaryotic promoters using convolutional deep learning neural networksGeneric eukaryotic core promoter prediction using structural features of DNA.Determining promoter location based on DNA structure first-principles calculationsProfiling the thermodynamic softness of adenoviral promoters.Core promoters are predicted by their distinct physicochemical properties in the genome of Plasmodium falciparum.Unravelling the hidden DNA structural/physical code provides novel insights on promoter locationIntegrating sequence, evolution and functional genomics in regulatory genomics.How epigenomics contributes to the understanding of gene regulation in Toxoplasma gondii.Towards accurate human promoter recognition: a review of currently used sequence features and classification methods.Divergent transcription and epigenetic directionality of human promoters.High-resolution human core-promoter prediction with CoreBoost_HM.Toward a gold standard for promoter prediction evaluation.Boosting with stumps for predicting transcription start sitesProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles.High DNA melting temperature predicts transcription start site location in human and mouse.Nucleotide patterns aiding in prediction of eukaryotic promoters.Finding homologs in amino acid sequences using network BLAST searches.Unix interfaces, Kleisli, bucandin structure, etc. -- the heroic beginning of bioinformatics in Singapore.Recent Advances in the Computational Discovery of Transcription Factor Binding Sites
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P2860
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
description
2006 nî lūn-bûn
@nan
2006年の論文
@ja
2006年論文
@yue
2006年論文
@zh-hant
2006年論文
@zh-hk
2006年論文
@zh-mo
2006年論文
@zh-tw
2006年论文
@wuu
2006年论文
@zh
2006年论文
@zh-cn
name
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
@ast
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
@en
type
label
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
@ast
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
@en
prefLabel
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
@ast
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
@en
P2093
P2860
P50
P356
P1433
P1476
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
@en
P2093
Michael R Brent
Randall H Brown
Sin Lam Tan
Victor V Solovyev
P2860
P2888
P304
P356
10.1186/GB-2006-7-S1-S3
P478
P577
2006-08-07T00:00:00Z
P5875
P6179
1025349187