A comparison of weighted ensemble and Markov state model methodologies.

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Comparative Normal Mode Analysis of the Dynamics of DENV and ZIKV Capsids Weighted Ensemble Simulation: Review of Methodology, Applications, and Software.Efficiently sampling conformations and pathways using the concurrent adaptive sampling (CAS) algorithm.

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P2860

A comparison of weighted ensemble and Markov state model methodologies.

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A comparison of weighted ensemble and Markov state model methodologies.

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A comparison of weighted ensemble and Markov state model methodologies.

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A comparison of weighted ensemble and Markov state model methodologies.

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A comparison of weighted ensemble and Markov state model methodologies.

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A comparison of weighted ensemble and Markov state model methodologies.

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A comparison of weighted ensemble and Markov state model methodologies.

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P1476

A comparison of weighted ensemble and Markov state model methodologies.

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P2093

Eric Darve

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Haoyun Feng

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Jesús A Izaguirre

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Ronan Costaouec

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P2860

Everything you wanted to know about Markov State Models but were afraid to ask

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

Optimal use of data in parallel tempering simulations for the construction of discrete-state Markov models of biomolecular dynamics.

Weighted-ensemble Brownian dynamics simulations for protein association reactions.

AWE-WQ: fast-forwarding molecular dynamics using the accelerated weighted ensemble.

Efficient and verified simulation of a path ensemble for conformational change in a united-residue model of calmodulin.

Using generalized ensemble simulations and Markov state models to identify conformational states

The "weighted ensemble" path sampling method is statistically exact for a broad class of stochastic processes and binning procedures.

MSMBuilder2: Modeling Conformational Dynamics at the Picosecond to Millisecond Scale.

Is Alanine Dipeptide a Good Model for Representing the Torsional Preferences of Protein Backbones?

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scholarly article

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10.1063/1.4921890

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English

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142

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2015-06-01T00:00:00Z

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A comparison of weighted ensemble and Markov state model methodologies.

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P2860

P2860

A comparison of weighted ensemble and Markov state model methodologies.

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P1433

P1476

P2093

P2860

P304

P31

P356

P407

P433

P478

P577

P698

P932

P356

P1433

P1476

P2093

P2860

P304

P31

P356

P407

P433

P478

P577

P698

P932