A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection.
about
Incredible RNA: Dual Functions of Coding and NoncodingThe Plant Peptidome: An Expanding Repertoire of Structural Features and Biological FunctionsMethods to detect selection on noncoding DNAIdentifying (non-)coding RNAs and small peptides: challenges and opportunitiesHemotin, a Regulator of Phagocytosis Encoded by a Small ORF and Conserved across MetazoansSmall proteins: untapped area of potential biological importanceThe persistent contributions of RNA to eukaryotic gen(om)e architecture and cellular functionThe Arabidopsis Information Resource (TAIR): improved gene annotation and new toolsModular regulatory principles of large non-coding RNAsUnique genes in plants: specificities and conserved features throughout evolution.Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome.Genome-wide expression profiling of the Arabidopsis female gametophyte identifies families of small, secreted proteins.Hundreds of putatively functional small open reading frames in DrosophilaAn archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches.Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes.A binary search approach to whole-genome data analysisThe draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).Meeting report: a workshop on Best Practices in Genome Annotation.The Arabidopsis Information Resource (TAIR): gene structure and function annotation.Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor in Arabidopsis.Discovery and annotation of small proteins using genomics, proteomics, and computational approaches.Combining in silico prediction and ribosome profiling in a genome-wide search for novel putatively coding sORFs.Detecting small plant peptides using SPADA (Small Peptide Alignment Discovery Application)On the extent and role of the small proteome in the parasitic eukaryote Trypanosoma brucei.Small open reading frames: current prediction techniques and future prospect.Genome-wide characterization of intergenic polyadenylation sites redefines gene spaces in Arabidopsis thaliana.Positionally-conserved but sequence-diverged: identification of long non-coding RNAs in the Brassicaceae and Cleomaceae.ARA-PEPs: a repository of putative sORF-encoded peptides in Arabidopsis thaliana.Transcriptome-wide high-throughput deep m(6)A-seq reveals unique differential m(6)A methylation patterns between three organs in Arabidopsis thaliana.OrysPSSP: a comparative platform for small secreted proteins from rice and other plants.Small open reading frames associated with morphogenesis are hidden in plant genomes.The interaction between OsMADS57 and OsTB1 modulates rice tillering via DWARF14.Transcriptomic analysis of rice in response to iron deficiency and excess.Discovery and revision of Arabidopsis genes by proteogenomicsTargeting of Painting of fourth to roX1 and roX2 proximal sites suggests evolutionary links between dosage compensation and the regulation of the fourth chromosome in Drosophila melanogaster.On the Origin of De Novo Genes in Arabidopsis thaliana Populations.Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs.The proteome under translational control.PLAZA: a comparative genomics resource to study gene and genome evolution in plants.Identification of small secreted peptides (SSPs) in maize and expression analysis of partial SSP genes in reproductive tissues.
P2860
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P2860
A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection.
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
A large number of novel coding ...... /or under purifying selection.
@ast
A large number of novel coding ...... /or under purifying selection.
@en
type
label
A large number of novel coding ...... /or under purifying selection.
@ast
A large number of novel coding ...... /or under purifying selection.
@en
prefLabel
A large number of novel coding ...... /or under purifying selection.
@ast
A large number of novel coding ...... /or under purifying selection.
@en
P2860
P50
P356
P1433
P1476
A large number of novel coding ...... /or under purifying selection.
@en
P2093
Kousuke Hanada
P2860
P304
P356
10.1101/GR.5836207
P577
2007-03-29T00:00:00Z