Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders
about
The second decade of 3C technologies: detailed insights into nuclear organizationGetting the genome in shape: the formation of loops, domains and compartmentsCTCF: making the right connectionsRegulatory evolution of Tbx5 and the origin of paired appendagesThe cancer-associated CTCFL/BORIS protein targets multiple classes of genomic repeats, with a distinct binding and functional preference for humanoid-specific SVA transposable elementsRegulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elementsFunctional assessment of CTCF sites at cytokine-sensing mammary enhancers using CRISPR/Cas9 gene editing in miceInsulated Neighborhoods: Structural and Functional Units of Mammalian Gene Control.Functional Dissection of the Blocking and Bypass Activities of the Fab-8 Boundary in the Drosophila Bithorax ComplexRegions of very low H3K27me3 partition the Drosophila genome into topological domainsUncovering direct and indirect molecular determinants of chromatin loops using a computational integrative approach.DANIO-CODE: Toward an Encyclopedia of DNA Elements in Zebrafish.The 3D Genome as Moderator of Chromosomal Communication.TAD disruption as oncogenic driver.The three-dimensional genome: principles and roles of long-distance interactions.Topologically Associating Domains: An invariant framework or a dynamic scaffold?Topoisomerase II beta interacts with cohesin and CTCF at topological domain bordersTowards a predictive model of chromatin 3D organization.Evolution of the Genome 3D Organization: Comparison of Fused and Segregated Globin Gene Clusters.Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution.Deep homology in the age of next-generation sequencing.Topologically associated domains: a successful scaffold for the evolution of gene regulation in animals.Barcelona conference on epigenetics and cancer 2015: Coding and non-coding functions of the genome.Facultative CTCF sites moderate mammary super-enhancer activity and regulate juxtaposed gene in non-mammary cells.Topologically associating domains are ancient features that coincide with Metazoan clusters of extreme noncoding conservation.HAND2 Target Gene Regulatory Networks Control Atrioventricular Canal and Cardiac Valve Development.The Three-Dimensional Organization of Mammalian Genomes.Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical topological domains.HiTAD: detecting the structural and functional hierarchies of topologically associating domains from chromatin interactions.Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites.Evolutionarily Conserved Principles Predict 3D Chromatin Organization.Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo.The HoxD cluster is a dynamic and resilient TAD boundary controlling the segregation of antagonistic regulatory landscapes.Between form and function: the complexity of genome folding.4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C data.Computational prediction of CTCF/cohesin-based intra-TAD loops that insulate chromatin contacts and gene expression in mouse liver.Evolutionary stability of topologically associating domains is associated with conserved gene regulationEvolution of Homeobox Gene Clusters in Animals: The Giga-Cluster and Primary vs. Secondary ClusteringBloody Zebrafish: Novel Methods in Normal and Malignant Hematopoiesis4C-seq characterization of Drosophila BEAF binding regions provides evidence for highly variable long-distance interactions between active chromatin
P2860
Q26747370-ADE14F4D-36CC-4FC9-8DE7-41FE250FB2A5Q26800278-5CCBDA7E-0AC0-4ACA-938B-FBF8E6982568Q28079447-1186B534-C2CC-4B1F-9AA5-7D99ADB04F05Q28595944-3B35437A-92C7-415A-87F5-D5771A2D79B1Q28828237-ECF6ECEB-1A7B-4173-B308-7EFE44B20178Q30855713-618A02F9-13F6-441D-8436-10F76F3FD91EQ33635936-FF673C25-E22D-465B-A2AB-B50118D32583Q34545070-E51C82D7-4190-4D95-9BC2-B447F068BD9DQ36080255-A44C0ADD-D535-416B-B0F7-3DB123430E30Q36304411-479376F4-01DF-4F0F-BFB1-6BB4FE3D3990Q36380044-9D602E48-BF41-419E-A3FA-E19F169919A0Q36549306-AFE94017-7221-45C8-AAFC-D29105492021Q36678954-51CC827D-5398-4B76-AF7B-6E503185A222Q36936179-E19D92E2-AFFB-4A73-B76F-566AAF78AD8DQ36952028-2503104F-35D2-418C-B247-DA19D682950BQ37025424-93CA388C-80A2-4907-8744-E8FD6A320646Q37220917-3F61312C-6C20-4C37-8259-EB716E2EC5A7Q38666734-D2E1D907-72B2-45FA-89CA-FB60CD3FF40DQ38883756-8AF4CDFD-E5FA-4815-B5E4-5F0662F9DF1BQ39013266-0ABEA9AA-B8A6-4038-933C-F0497A959763Q39043805-1340DFB3-7239-42FF-A8EC-18195CADA7BAQ39157796-7A530963-C752-4BA1-A41C-D2F9A9A5DF3EQ40658995-60143081-5877-4861-8953-616BAAE28B98Q41077858-3BF950A5-211B-4F9A-A138-510456FA1716Q41620969-8EFED5B1-CA08-4D3B-B828-0DE6D7436771Q42776614-817D0C95-F803-4D96-9E87-F0EE08C6A3FBQ46383154-C68725DA-E8CF-4DF5-A014-907AAE4877EEQ47158127-61046EAB-4A93-42B6-80C2-600FB8D92FCCQ47159941-EB8F8787-8BAC-4CD3-92B1-D3E00462E92CQ47596475-8546D664-64CC-4DD1-8CBF-4307C5D26EFCQ47926146-94175F40-591F-4676-B3A6-ED48AE306086Q48358053-FB17C5A7-18FE-4593-A9A0-A546FB8C39A8Q49606789-66ED5F61-216C-4E60-ACAE-57A90066E318Q49608428-2E8329C3-36EB-4EFC-B46A-67778BD07724Q52664423-128E1361-766C-4F1F-B0DE-780F00613166Q54995341-BD3DD57E-FA1E-49B8-81FA-C507CCC6129FQ57629971-BA771E6B-EFDC-436F-B4CA-49291E1BCD35Q57898695-A3FF0EC1-6814-4EA8-8535-08F96AD6D9ACQ58122003-AF2E1541-A307-4995-B93A-F7D82679B8C6Q58701385-2C9A43DE-0754-4776-9F70-5C926E088E02
P2860
Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders
description
2015 nî lūn-bûn
@nan
2015年の論文
@ja
2015年論文
@yue
2015年論文
@zh-hant
2015年論文
@zh-hk
2015年論文
@zh-mo
2015年論文
@zh-tw
2015年论文
@wuu
2015年论文
@zh
2015年论文
@zh-cn
name
Evolutionary comparison reveal ...... al associating domains borders
@ast
Evolutionary comparison reveal ...... al associating domains borders
@en
type
label
Evolutionary comparison reveal ...... al associating domains borders
@ast
Evolutionary comparison reveal ...... al associating domains borders
@en
prefLabel
Evolutionary comparison reveal ...... al associating domains borders
@ast
Evolutionary comparison reveal ...... al associating domains borders
@en
P2093
P2860
P50
P356
P1476
Evolutionary comparison reveal ...... al associating domains borders
@en
P2093
Erika Vielmas
José Luis Gómez-Skarmeta
Macarena López-Mayorga
Marcelo A Nobrega
P2860
P304
P356
10.1073/PNAS.1505463112
P407
P50
P577
2015-06-01T00:00:00Z