Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information. - Wikidata - wikimedia - TriplyDB

Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information.

Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information.

http://www.wikidata.org/entity/Q35902162

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Peptide orientation affects selectivity in ion-exchange chromatography High and low doses of ionizing radiation induce different secretome profiles in a human skin model Intelligent data acquisition blends targeted and discovery methods.Generation of accurate peptide retention data for targeted and data independent quantitative LC-MS analysis: Chromatographic lessons in proteomics.Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational proteomics.A robust linear regression based algorithm for automated evaluation of peptide identifications from shotgun proteomics by use of reversed-phase liquid chromatography retention time.LC-MSsim--a simulation software for liquid chromatography mass spectrometry data Global systems-level analysis of Hfq and SmpB deletion mutants in Salmonella: implications for virulence and global protein translation Artificial neural networks for the prediction of peptide drift time in ion mobility mass spectrometry.Pressurized pepsin digestion in proteomics: an automatable alternative to trypsin for integrated top-down bottom-up proteomics.Mapping protein abundance patterns in the brain using voxelation combined with liquid chromatography and mass spectrometry.Systems analysis of multiple regulator perturbations allows discovery of virulence factors in Salmonella.Evolving neural network optimization of cholesteryl ester separation by reversed-phase HPLC.Machine learning based prediction for peptide drift times in ion mobility spectrometry Platelet proteome changes associated with diabetes and during platelet storage for transfusion.Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technological Aspects.Characterization of macaque pulmonary fluid proteome during monkeypox infection: dynamics of host response RT-SVR+q: a strategy for post-Mascot analysis using retention time and q value metric to improve peptide and protein identifications Scientific workflow optimization for improved peptide and protein identification.Phosphopeptide elution times in reversed-phase liquid chromatography Morphine produces immunosuppressive effects in nonhuman primates at the proteomic and cellular levels Amino acid substitutions in random mutagenesis libraries: lessons from analyzing 3000 mutations.A multi-omic systems approach to elucidating Yersinia virulence mechanisms.Serum proteomics reveals systemic dysregulation of innate immunity in type 1 diabetes.In-source fragmentation and the sources of partially tryptic peptides in shotgun proteomics.Comparative proteomics of human monkeypox and vaccinia intracellular mature and extracellular enveloped virions Accurate mass measurements in proteomics.Proteomic analysis of saliva in HIV-positive heroin addicts reveals proteins correlated with cognition.Locus-specific Retention Predictor (LsRP): A Peptide Retention Time Predictor Developed for Precision Proteomics.Optimal selection of 2D reversed-phase-reversed-phase HPLC separation techniques in bottom-up proteomics.The use of selected reaction monitoring in quantitative proteomics.Machine learning applications in proteomics research: how the past can boost the future.CE-ESI-MS for bottom-up proteomics: Advances in separation, interfacing and applications.Peptide retention time prediction.Improved sequence variant analysis strategy by automated false positive removal.Predicting Electrophoretic Mobility of Tryptic Peptides for High-Throughput CZE-MS Analysis.Predictive chromatography of peptides and proteins as a complementary tool for proteomics.Uncertainty estimation of predictions of peptides' chromatographic retention times in shotgun proteomics.Comparison of peptide retention prediction algorithm in reversed-phase chromatography. Comment on "Predictive chromatography of peptides and proteins as a complementary tool for proteomics", by I. A. Tarasova, C. D. Masselon, A. V. Gorshkov and M. V Multi-mode acquisition (MMA): An MS/MS acquisition strategy for maximizing selectivity, specificity and sensitivity of DIA product ion spectra.

P2860

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P2860

Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information.

http://www.wikidata.org/entity/Q35902162

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Improved peptide elution time ...... peptide sequence information.

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Bo Yan

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David G Camp

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Eric F Strittmatter

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Konstantinos Petritis

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Lars J Kangas

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Mary S Lipton

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Matthew E Monroe

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Ronald J Moore

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Ying Xu

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P2860

Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags

Integrative analysis of the mitochondrial proteome in yeast

Protein secondary structure prediction based on position-specific scoring matrices

Mesoscopic simulation of adsorption of peptides in a hydrophobic chromatography system.

ESI-FTICR mass spectrometry employing data-dependent external ion selection and accumulation.

Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline.

An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: its application to protein peptide mapping by off-line HPLC-MALDI MS.

Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations.

Prediction of protein subcellular locations by incorporating quasi-sequence-order effect.

Prediction of protein cellular attributes using pseudo-amino acid composition.

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5026-5039

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10.1021/AC060143P

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14

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78

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Joshua N Adkins

Richard D. Smith

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2006-07-01T00:00:00Z

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6943641

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1924966

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